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SNORD154 (small nucleolar RNA, C/D box 154)

Identity

Other alias-
HGNC (Hugo) SNORD154
LocusID (NCBI) 109623474
Atlas_Id 79051
Location 20q12  [Link to chromosome band 20q12]
Location_base_pair Starts at 40714572 and ends at 40714623 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD154   51868
Cards
Entrez_Gene (NCBI)SNORD154  109623474  small nucleolar RNA, C/D box 154
Aliases
GeneCards (Weizmann)SNORD154
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:40714572-40714623 [Contig_View]  SNORD154 [Vega]
TCGA cBioPortalSNORD154
AceView (NCBI)SNORD154
Genatlas (Paris)SNORD154
WikiGenes109623474
SOURCE (Princeton)SNORD154
Genetics Home Reference (NIH)SNORD154
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD154  -     chr20:40714572-40714623 -  20q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD154  -     20q12   [Description]    (hg19-Feb_2009)
EnsemblSNORD154 - 20q12 [CytoView hg19]  SNORD154 - 20q12 [CytoView hg38]
Mapping of homologs : NCBISNORD154 [Mapview hg19]  SNORD154 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD154
Gene ExpressionSNORD154 [ NCBI-GEO ]   SNORD154 [ EBI - ARRAY_EXPRESS ]   SNORD154 [ SEEK ]   SNORD154 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD154 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623474
GTEX Portal (Tissue expression)SNORD154
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD154
DMDM Disease mutations109623474
Blocks (Seattle)SNORD154
Protein Interaction databases
BioGRIDSNORD154
STRING (EMBL)SNORD154
ZODIACSNORD154
Ontologies - Pathways
Huge Navigator SNORD154 [HugePedia]
snp3D : Map Gene to Disease109623474
BioCentury BCIQSNORD154
ClinGenSNORD154
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623474
Clinical trialSNORD154
Miscellaneous
canSAR (ICR)SNORD154 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD154
EVEXSNORD154
GoPubMedSNORD154
iHOPSNORD154
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:42:17 CET 2017

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