Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SNORD158 (small nucleolar RNA, C/D box 158)

Identity

Alias (NCBI)-
HGNC (Hugo) SNORD158
LocusID (NCBI) 109623470
Atlas_Id 80144
Location 10q25.3  [Link to chromosome band 10q25]
Location_base_pair Starts at 116194732 and ends at 116194789 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SNORD158   51872
Cards
Entrez_Gene (NCBI)SNORD158    small nucleolar RNA, C/D box 158
Aliases
GeneCards (Weizmann)SNORD158
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:116194732-116194789 [Contig_View]  SNORD158 [Vega]
TCGA cBioPortalSNORD158
AceView (NCBI)SNORD158
Genatlas (Paris)SNORD158
SOURCE (Princeton)SNORD158
Genetics Home Reference (NIH)SNORD158
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD158  -     chr10:116194732-116194789 -  10q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD158  -     10q25.3   [Description]    (hg19-Feb_2009)
GoldenPathSNORD158 - 10q25.3 [CytoView hg19]  SNORD158 - 10q25.3 [CytoView hg38]
Genome Data Viewer NCBISNORD158 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD158
Gene ExpressionSNORD158 [ NCBI-GEO ]   SNORD158 [ EBI - ARRAY_EXPRESS ]   SNORD158 [ SEEK ]   SNORD158 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD158 [ Firebrowse - Broad ]
GenevisibleExpression of SNORD158 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)109623470
GTEX Portal (Tissue expression)SNORD158
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD158
Protein Interaction databases
BioGRIDSNORD158
STRING (EMBL)SNORD158
ZODIACSNORD158
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNORD158
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:23:02 CEST 2021

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