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SNORD161 (small nucleolar RNA, C/D box 161)

Identity

Other alias-
HGNC (Hugo) SNORD161
LocusID (NCBI) 109623453
Atlas_Id 79566
Location 4q21.21  [Link to chromosome band 4q21]
Location_base_pair Starts at 78288985 and ends at 78289050 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD161   51875
Cards
Entrez_Gene (NCBI)SNORD161  109623453  small nucleolar RNA, C/D box 161
Aliases
GeneCards (Weizmann)SNORD161
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr4:78288985-78289050 [Contig_View]  SNORD161 [Vega]
TCGA cBioPortalSNORD161
AceView (NCBI)SNORD161
Genatlas (Paris)SNORD161
WikiGenes109623453
SOURCE (Princeton)SNORD161
Genetics Home Reference (NIH)SNORD161
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD161  -     chr4:78288985-78289050 +  4q21.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD161  -     4q21.21   [Description]    (hg19-Feb_2009)
EnsemblSNORD161 - 4q21.21 [CytoView hg19]  SNORD161 - 4q21.21 [CytoView hg38]
Mapping of homologs : NCBISNORD161 [Mapview hg19]  SNORD161 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD161
Gene ExpressionSNORD161 [ NCBI-GEO ]   SNORD161 [ EBI - ARRAY_EXPRESS ]   SNORD161 [ SEEK ]   SNORD161 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD161 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623453
GTEX Portal (Tissue expression)SNORD161
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD161
DMDM Disease mutations109623453
Blocks (Seattle)SNORD161
Protein Interaction databases
BioGRIDSNORD161
STRING (EMBL)SNORD161
ZODIACSNORD161
Ontologies - Pathways
Huge Navigator SNORD161 [HugePedia]
snp3D : Map Gene to Disease109623453
BioCentury BCIQSNORD161
ClinGenSNORD161
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623453
Clinical trialSNORD161
Miscellaneous
canSAR (ICR)SNORD161 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD161
EVEXSNORD161
GoPubMedSNORD161
iHOPSNORD161
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:31:49 CEST 2018

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