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SNORD162 (small nucleolar RNA, C/D box 162)

Identity

Other alias-
HGNC (Hugo) SNORD162
LocusID (NCBI) 109623454
Atlas_Id 79188
Location 4p16.2  [Link to chromosome band 4p16]
Location_base_pair Starts at 4664326 and ends at 4664423 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD162   51876
Cards
Entrez_Gene (NCBI)SNORD162  109623454  small nucleolar RNA, C/D box 162
Aliases
GeneCards (Weizmann)SNORD162
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr4:4664326-4664423 [Contig_View]  SNORD162 [Vega]
TCGA cBioPortalSNORD162
AceView (NCBI)SNORD162
Genatlas (Paris)SNORD162
WikiGenes109623454
SOURCE (Princeton)SNORD162
Genetics Home Reference (NIH)SNORD162
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD162  -     chr4:4664326-4664423 +  4p16.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD162  -     4p16.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD162 - 4p16.2 [CytoView hg19]  SNORD162 - 4p16.2 [CytoView hg38]
Mapping of homologs : NCBISNORD162 [Mapview hg19]  SNORD162 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD162
Gene ExpressionSNORD162 [ NCBI-GEO ]   SNORD162 [ EBI - ARRAY_EXPRESS ]   SNORD162 [ SEEK ]   SNORD162 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD162 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623454
GTEX Portal (Tissue expression)SNORD162
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD162
DMDM Disease mutations109623454
Blocks (Seattle)SNORD162
Protein Interaction databases
BioGRIDSNORD162
STRING (EMBL)SNORD162
ZODIACSNORD162
Ontologies - Pathways
Huge Navigator SNORD162 [HugePedia]
snp3D : Map Gene to Disease109623454
BioCentury BCIQSNORD162
ClinGenSNORD162
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623454
Clinical trialSNORD162
Miscellaneous
canSAR (ICR)SNORD162 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD162
EVEXSNORD162
GoPubMedSNORD162
iHOPSNORD162
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:31:49 CEST 2018

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