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SNORD166 (small nucleolar RNA, C/D box 166)

Identity

Other alias-
HGNC (Hugo) SNORD166
LocusID (NCBI) 109623478
Atlas_Id 79877
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 111113834 and ends at 111113939 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD166   51880
Cards
Entrez_Gene (NCBI)SNORD166  109623478  small nucleolar RNA, C/D box 166
Aliases
GeneCards (Weizmann)SNORD166
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:111113834-111113939 [Contig_View]  SNORD166 [Vega]
TCGA cBioPortalSNORD166
AceView (NCBI)SNORD166
Genatlas (Paris)SNORD166
WikiGenes109623478
SOURCE (Princeton)SNORD166
Genetics Home Reference (NIH)SNORD166
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD166  -     chr6:111113834-111113939 +  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD166  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblSNORD166 - 6q21 [CytoView hg19]  SNORD166 - 6q21 [CytoView hg38]
Mapping of homologs : NCBISNORD166 [Mapview hg19]  SNORD166 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD166
Gene ExpressionSNORD166 [ NCBI-GEO ]   SNORD166 [ EBI - ARRAY_EXPRESS ]   SNORD166 [ SEEK ]   SNORD166 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD166 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623478
GTEX Portal (Tissue expression)SNORD166
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD166
DMDM Disease mutations109623478
Blocks (Seattle)SNORD166
Protein Interaction databases
BioGRIDSNORD166
STRING (EMBL)SNORD166
ZODIACSNORD166
Ontologies - Pathways
Huge Navigator SNORD166 [HugePedia]
snp3D : Map Gene to Disease109623478
BioCentury BCIQSNORD166
ClinGenSNORD166
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623478
Clinical trialSNORD166
Miscellaneous
canSAR (ICR)SNORD166 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD166
EVEXSNORD166
GoPubMedSNORD166
iHOPSNORD166
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:31:50 CEST 2018

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