Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD17 (small nucleolar RNA, C/D box 17)

Identity

Alias_symbol (synonym)HBI-43
Other alias
HGNC (Hugo) SNORD17
LocusID (NCBI) 692086
Atlas_Id 73911
Location 20p11.23  [Link to chromosome band 20p11]
Location_base_pair Starts at 17943353 and ends at 17943589 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD17   32713
Cards
Entrez_Gene (NCBI)SNORD17  692086  small nucleolar RNA, C/D box 17
AliasesHBI-43
GeneCards (Weizmann)SNORD17
Ensembl hg19 (Hinxton) [Gene_View]  chr20:17943353-17943589 [Contig_View]  SNORD17 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:17943353-17943589 [Contig_View]  SNORD17 [Vega]
TCGA cBioPortalSNORD17
AceView (NCBI)SNORD17
Genatlas (Paris)SNORD17
WikiGenes692086
SOURCE (Princeton)SNORD17
Genetics Home Reference (NIH)SNORD17
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD17  -     chr20:17943353-17943589 -  20p11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD17  -     20p11.23   [Description]    (hg38-Dec_2013)
EnsemblSNORD17 - 20p11.23 [CytoView hg19]  SNORD17 - 20p11.23 [CytoView hg38]
Mapping of homologs : NCBISNORD17 [Mapview hg19]  SNORD17 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)SNORD17
Cluster EST : UnigeneHs.680747 [ NCBI ]
CGAP (NCI)Hs.680747
Gene ExpressionSNORD17 [ NCBI-GEO ]   SNORD17 [ EBI - ARRAY_EXPRESS ]   SNORD17 [ SEEK ]   SNORD17 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692086
GTEX Portal (Tissue expression)SNORD17
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD17
DMDM Disease mutations692086
Blocks (Seattle)SNORD17
Protein Interaction databases
BioGRIDSNORD17
STRING (EMBL)SNORD17
ZODIACSNORD17
Ontologies - Pathways
Huge Navigator SNORD17 [HugePedia]
snp3D : Map Gene to Disease692086
BioCentury BCIQSNORD17
ClinGenSNORD17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692086
Chemical/Pharm GKB GenePA145007815
Clinical trialSNORD17
Miscellaneous
canSAR (ICR)SNORD17 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD17
EVEXSNORD17
GoPubMedSNORD17
iHOPSNORD17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:36 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.