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SNORD170 (small nucleolar RNA, C/D box 170)

Identity

Other alias-
HGNC (Hugo) SNORD170
LocusID (NCBI) 109623458
Atlas_Id 79966
Location 5p15.2  [Link to chromosome band 5p15]
Location_base_pair Starts at 14463983 and ends at 14464067 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD170   51884
Cards
Entrez_Gene (NCBI)SNORD170  109623458  small nucleolar RNA, C/D box 170
Aliases
GeneCards (Weizmann)SNORD170
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:14463983-14464067 [Contig_View]  SNORD170 [Vega]
TCGA cBioPortalSNORD170
AceView (NCBI)SNORD170
Genatlas (Paris)SNORD170
WikiGenes109623458
SOURCE (Princeton)SNORD170
Genetics Home Reference (NIH)SNORD170
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD170  -     chr5:14463983-14464067 +  5p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD170  -     5p15.2   [Description]    (hg19-Feb_2009)
SNORD170 - 5p15.2 [CytoView hg19]  SNORD170 - 5p15.2 [CytoView hg38]
Mapping of homologs : NCBISNORD170 [Mapview hg19]  SNORD170 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD170
Gene ExpressionSNORD170 [ NCBI-GEO ]   SNORD170 [ EBI - ARRAY_EXPRESS ]   SNORD170 [ SEEK ]   SNORD170 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD170 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109623458
GTEX Portal (Tissue expression)SNORD170
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD170
DMDM Disease mutations109623458
Blocks (Seattle)SNORD170
Protein Interaction databases
BioGRIDSNORD170
STRING (EMBL)SNORD170
ZODIACSNORD170
Ontologies - Pathways
Huge Navigator SNORD170 [HugePedia]
snp3D : Map Gene to Disease109623458
BioCentury BCIQSNORD170
ClinGenSNORD170
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109623458
Clinical trialSNORD170
Miscellaneous
canSAR (ICR)SNORD170 (select the gene name)
DataMed IndexSNORD170
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD170
EVEXSNORD170
GoPubMedSNORD170
iHOPSNORD170
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:57:52 CEST 2019

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