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SNORD1A (small nucleolar RNA, C/D box 1A)

Identity

Alias_symbol (synonym)R38A
snR38A
Other alias
HGNC (Hugo) SNORD1A
LocusID (NCBI) 677848
Atlas_Id 73917
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 76561633 and ends at 76561706 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD1A   32556
Cards
Entrez_Gene (NCBI)SNORD1A  677848  small nucleolar RNA, C/D box 1A
AliasesR38A; snR38A
GeneCards (Weizmann)SNORD1A
Ensembl hg19 (Hinxton)ENSG00000278261 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278261 [Gene_View]  chr17:76561633-76561706 [Contig_View]  SNORD1A [Vega]
ICGC DataPortalENSG00000278261
TCGA cBioPortalSNORD1A
AceView (NCBI)SNORD1A
Genatlas (Paris)SNORD1A
WikiGenes677848
SOURCE (Princeton)SNORD1A
Genetics Home Reference (NIH)SNORD1A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD1A  -     chr17:76561633-76561706 +  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD1A  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD1A - 17q25.1 [CytoView hg19]  SNORD1A - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBISNORD1A [Mapview hg19]  SNORD1A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD1A
Alternative Splicing GalleryENSG00000278261
Gene ExpressionSNORD1A [ NCBI-GEO ]   SNORD1A [ EBI - ARRAY_EXPRESS ]   SNORD1A [ SEEK ]   SNORD1A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD1A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677848
GTEX Portal (Tissue expression)SNORD1A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD1A
DMDM Disease mutations677848
Blocks (Seattle)SNORD1A
Human Protein AtlasENSG00000278261
Protein Interaction databases
FunCoupENSG00000278261
BioGRIDSNORD1A
STRING (EMBL)SNORD1A
ZODIACSNORD1A
Ontologies - Pathways
Huge Navigator SNORD1A [HugePedia]
snp3D : Map Gene to Disease677848
BioCentury BCIQSNORD1A
ClinGenSNORD1A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677848
Chemical/Pharm GKB GenePA144596284
Clinical trialSNORD1A
Miscellaneous
canSAR (ICR)SNORD1A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD1A
EVEXSNORD1A
GoPubMedSNORD1A
iHOPSNORD1A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:39:42 CEST 2017

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