Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD20 (small nucleolar RNA, C/D box 20)

Identity

Alias_namesRNU20
RNA, U20 small nucleolar
Alias_symbol (synonym)U20
Other alias
HGNC (Hugo) SNORD20
LocusID (NCBI) 6082
Atlas_Id 73921
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 231456444 and ends at 231456523 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD20   10143
Cards
Entrez_Gene (NCBI)SNORD20  6082  small nucleolar RNA, C/D box 20
AliasesRNU20; U20
GeneCards (Weizmann)SNORD20
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:231456444-231456523 [Contig_View]  SNORD20 [Vega]
TCGA cBioPortalSNORD20
AceView (NCBI)SNORD20
Genatlas (Paris)SNORD20
WikiGenes6082
SOURCE (Princeton)SNORD20
Genetics Home Reference (NIH)SNORD20
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD20  -     chr2:231456444-231456523 -  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD20  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD20 - 2q37.1 [CytoView hg19]  SNORD20 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBISNORD20 [Mapview hg19]  SNORD20 [Mapview hg38]
OMIM604012   
Gene and transcription
Genbank (Entrez)Z34290
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD20
Gene ExpressionSNORD20 [ NCBI-GEO ]   SNORD20 [ EBI - ARRAY_EXPRESS ]   SNORD20 [ SEEK ]   SNORD20 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6082
GTEX Portal (Tissue expression)SNORD20
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD20
DMDM Disease mutations6082
Blocks (Seattle)SNORD20
Protein Interaction databases
BioGRIDSNORD20
STRING (EMBL)SNORD20
ZODIACSNORD20
Ontologies - Pathways
Huge Navigator SNORD20 [HugePedia]
snp3D : Map Gene to Disease6082
BioCentury BCIQSNORD20
ClinGenSNORD20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6082
Chemical/Pharm GKB GenePA34509
Clinical trialSNORD20
Miscellaneous
canSAR (ICR)SNORD20 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD20
EVEXSNORD20
GoPubMedSNORD20
iHOPSNORD20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:39:43 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.