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SNORD21 (small nucleolar RNA, C/D box 21)

Identity

Alias_namesRNU21
RNA, U21 small nucleolar
Alias_symbol (synonym)U21
Other alias
HGNC (Hugo) SNORD21
LocusID (NCBI) 6083
Atlas_Id 73922
Location 1p22.1  [Link to chromosome band 1p22]
Location_base_pair Starts at 92837289 and ends at 92837383 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD21   10144
Cards
Entrez_Gene (NCBI)SNORD21  6083  small nucleolar RNA, C/D box 21
AliasesRNU21; U21
GeneCards (Weizmann)SNORD21
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:92837289-92837383 [Contig_View]  SNORD21 [Vega]
TCGA cBioPortalSNORD21
AceView (NCBI)SNORD21
Genatlas (Paris)SNORD21
WikiGenes6083
SOURCE (Princeton)SNORD21
Genetics Home Reference (NIH)SNORD21
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD21  -     chr1:92837289-92837383 +  1p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD21  -     1p22.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD21 - 1p22.1 [CytoView hg19]  SNORD21 - 1p22.1 [CytoView hg38]
Mapping of homologs : NCBISNORD21 [Mapview hg19]  SNORD21 [Mapview hg38]
OMIM603635   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD21
Gene ExpressionSNORD21 [ NCBI-GEO ]   SNORD21 [ EBI - ARRAY_EXPRESS ]   SNORD21 [ SEEK ]   SNORD21 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD21 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6083
GTEX Portal (Tissue expression)SNORD21
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD21
DMDM Disease mutations6083
Blocks (Seattle)SNORD21
Protein Interaction databases
BioGRIDSNORD21
STRING (EMBL)SNORD21
ZODIACSNORD21
Ontologies - Pathways
Huge Navigator SNORD21 [HugePedia]
snp3D : Map Gene to Disease6083
BioCentury BCIQSNORD21
ClinGenSNORD21
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6083
Chemical/Pharm GKB GenePA34510
Clinical trialSNORD21
Miscellaneous
canSAR (ICR)SNORD21 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD21
EVEXSNORD21
GoPubMedSNORD21
iHOPSNORD21
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:29:49 CET 2017

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