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SNORD25 (small nucleolar RNA, C/D box 25)

Identity

Alias_namesRNU25
RNA, U25 small nucleolar
Alias_symbol (synonym)U25
Other alias
HGNC (Hugo) SNORD25
LocusID (NCBI) 9303
Atlas_Id 73926
Location 11q12.3  [Link to chromosome band 11q12]
Location_base_pair Starts at 62855565 and ends at 62855631 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD25   10147
Cards
Entrez_Gene (NCBI)SNORD25  9303  small nucleolar RNA, C/D box 25
AliasesRNU25; U25
GeneCards (Weizmann)SNORD25
Ensembl hg19 (Hinxton)ENSG00000275043 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275043 [Gene_View]  chr11:62855565-62855631 [Contig_View]  SNORD25 [Vega]
ICGC DataPortalENSG00000275043
TCGA cBioPortalSNORD25
AceView (NCBI)SNORD25
Genatlas (Paris)SNORD25
WikiGenes9303
SOURCE (Princeton)SNORD25
Genetics Home Reference (NIH)SNORD25
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD25  -     chr11:62855565-62855631 -  11q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD25  -     11q12.3   [Description]    (hg19-Feb_2009)
EnsemblSNORD25 - 11q12.3 [CytoView hg19]  SNORD25 - 11q12.3 [CytoView hg38]
Mapping of homologs : NCBISNORD25 [Mapview hg19]  SNORD25 [Mapview hg38]
OMIM603224   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD25
Alternative Splicing GalleryENSG00000275043
Gene ExpressionSNORD25 [ NCBI-GEO ]   SNORD25 [ EBI - ARRAY_EXPRESS ]   SNORD25 [ SEEK ]   SNORD25 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD25 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)9303
GTEX Portal (Tissue expression)SNORD25
Human Protein AtlasENSG00000275043-SNORD25 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD25
DMDM Disease mutations9303
Blocks (Seattle)SNORD25
Human Protein Atlas [tissue]ENSG00000275043-SNORD25 [tissue]
Protein Interaction databases
FunCoupENSG00000275043
BioGRIDSNORD25
STRING (EMBL)SNORD25
ZODIACSNORD25
Ontologies - Pathways
Huge Navigator SNORD25 [HugePedia]
snp3D : Map Gene to Disease9303
BioCentury BCIQSNORD25
ClinGenSNORD25
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9303
Chemical/Pharm GKB GenePA34513
Clinical trialSNORD25
Miscellaneous
canSAR (ICR)SNORD25 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD25
EVEXSNORD25
GoPubMedSNORD25
iHOPSNORD25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:29:50 CET 2017

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