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SNORD38A (small nucleolar RNA, C/D box 38A)

Identity

Alias_namesRNU38A
RNA, U38A small nucleolar
Alias_symbol (synonym)U38A
Other alias
HGNC (Hugo) SNORD38A
LocusID (NCBI) 94162
Atlas_Id 73943
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 44777842 and ends at 44777912 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD38A   30355
Cards
Entrez_Gene (NCBI)SNORD38A  94162  small nucleolar RNA, C/D box 38A
AliasesRNU38A; U38A
GeneCards (Weizmann)SNORD38A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:44777842-44777912 [Contig_View]  SNORD38A [Vega]
TCGA cBioPortalSNORD38A
AceView (NCBI)SNORD38A
Genatlas (Paris)SNORD38A
WikiGenes94162
SOURCE (Princeton)SNORD38A
Genetics Home Reference (NIH)SNORD38A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD38A  -     chr1:44777842-44777912 +  1p34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD38A  -     1p34.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD38A - 1p34.1 [CytoView hg19]  SNORD38A - 1p34.1 [CytoView hg38]
Mapping of homologs : NCBISNORD38A [Mapview hg19]  SNORD38A [Mapview hg38]
Gene and transcription
Genbank (Entrez)X97582
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD38A
Gene ExpressionSNORD38A [ NCBI-GEO ]   SNORD38A [ EBI - ARRAY_EXPRESS ]   SNORD38A [ SEEK ]   SNORD38A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD38A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)94162
GTEX Portal (Tissue expression)SNORD38A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD38A
DMDM Disease mutations94162
Blocks (Seattle)SNORD38A
Protein Interaction databases
BioGRIDSNORD38A
STRING (EMBL)SNORD38A
ZODIACSNORD38A
Ontologies - Pathways
Huge Navigator SNORD38A [HugePedia]
snp3D : Map Gene to Disease94162
BioCentury BCIQSNORD38A
ClinGenSNORD38A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94162
Chemical/Pharm GKB GenePA134917279
Clinical trialSNORD38A
Miscellaneous
canSAR (ICR)SNORD38A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD38A
EVEXSNORD38A
GoPubMedSNORD38A
iHOPSNORD38A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:43:13 CEST 2017

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