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SNORD38B (small nucleolar RNA, C/D box 38B)

Identity

Alias_namesRNU38B
RNA, U38B small nucleolar
Alias_symbol (synonym)U38B
Other alias
HGNC (Hugo) SNORD38B
LocusID (NCBI) 94163
Atlas_Id 73944
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 44778390 and ends at 44778458 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD38B   30356
Cards
Entrez_Gene (NCBI)SNORD38B  94163  small nucleolar RNA, C/D box 38B
AliasesRNU38B; U38B
GeneCards (Weizmann)SNORD38B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:44778390-44778458 [Contig_View]  SNORD38B [Vega]
TCGA cBioPortalSNORD38B
AceView (NCBI)SNORD38B
Genatlas (Paris)SNORD38B
WikiGenes94163
SOURCE (Princeton)SNORD38B
Genetics Home Reference (NIH)SNORD38B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD38B  -     chr1:44778390-44778458 +  1p34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD38B  -     1p34.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD38B - 1p34.1 [CytoView hg19]  SNORD38B - 1p34.1 [CytoView hg38]
Mapping of homologs : NCBISNORD38B [Mapview hg19]  SNORD38B [Mapview hg38]
Gene and transcription
Genbank (Entrez)X97583
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD38B
Gene ExpressionSNORD38B [ NCBI-GEO ]   SNORD38B [ EBI - ARRAY_EXPRESS ]   SNORD38B [ SEEK ]   SNORD38B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD38B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)94163
GTEX Portal (Tissue expression)SNORD38B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD38B
DMDM Disease mutations94163
Blocks (Seattle)SNORD38B
Protein Interaction databases
BioGRIDSNORD38B
STRING (EMBL)SNORD38B
ZODIACSNORD38B
Ontologies - Pathways
Huge Navigator SNORD38B [HugePedia]
snp3D : Map Gene to Disease94163
BioCentury BCIQSNORD38B
ClinGenSNORD38B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94163
Chemical/Pharm GKB GenePA134884302
Clinical trialSNORD38B
Miscellaneous
canSAR (ICR)SNORD38B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD38B
EVEXSNORD38B
GoPubMedSNORD38B
iHOPSNORD38B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:15:18 CET 2017

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