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SNORD3C (small nucleolar RNA, C/D box 3C)

Identity

Alias_symbol (synonym)U3-3
RNU3-3
Other alias
HGNC (Hugo) SNORD3C
LocusID (NCBI) 780853
Atlas_Id 79064
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 19190029 and ends at 19190245 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD3C   33191
Cards
Entrez_Gene (NCBI)SNORD3C  780853  small nucleolar RNA, C/D box 3C
AliasesRNU3-3; U3-3
GeneCards (Weizmann)SNORD3C
Ensembl hg19 (Hinxton)ENSG00000264940 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264940 [Gene_View]  chr17:19190029-19190245 [Contig_View]  SNORD3C [Vega]
ICGC DataPortalENSG00000264940
TCGA cBioPortalSNORD3C
AceView (NCBI)SNORD3C
Genatlas (Paris)SNORD3C
WikiGenes780853
SOURCE (Princeton)SNORD3C
Genetics Home Reference (NIH)SNORD3C
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD3C  -     chr17:19190029-19190245 -  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD3C  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD3C - 17p11.2 [CytoView hg19]  SNORD3C - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD3C [Mapview hg19]  SNORD3C [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD3C
Alternative Splicing GalleryENSG00000264940
Gene ExpressionSNORD3C [ NCBI-GEO ]   SNORD3C [ EBI - ARRAY_EXPRESS ]   SNORD3C [ SEEK ]   SNORD3C [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD3C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)780853
GTEX Portal (Tissue expression)SNORD3C
Human Protein AtlasENSG00000264940-SNORD3C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD3C
DMDM Disease mutations780853
Blocks (Seattle)SNORD3C
Human Protein Atlas [tissue]ENSG00000264940-SNORD3C [tissue]
Protein Interaction databases
FunCoupENSG00000264940
BioGRIDSNORD3C
STRING (EMBL)SNORD3C
ZODIACSNORD3C
Ontologies - Pathways
Huge Navigator SNORD3C [HugePedia]
snp3D : Map Gene to Disease780853
BioCentury BCIQSNORD3C
ClinGenSNORD3C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD780853
Chemical/Pharm GKB GenePA162404300
Clinical trialSNORD3C
Miscellaneous
canSAR (ICR)SNORD3C (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD3C
EVEXSNORD3C
GoPubMedSNORD3C
iHOPSNORD3C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:36:56 CET 2017

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