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SNORD3E (small nucleolar RNA, C/D box 3E)

Identity

Other alias-
HGNC (Hugo) SNORD3E
LocusID (NCBI) 109617015
Atlas_Id 78975
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 70846081 and ends at 70846295 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD3E   52238
Cards
Entrez_Gene (NCBI)SNORD3E  109617015  small nucleolar RNA, C/D box 3E
Aliases
GeneCards (Weizmann)SNORD3E
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:70846081-70846295 [Contig_View]  SNORD3E [Vega]
TCGA cBioPortalSNORD3E
AceView (NCBI)SNORD3E
Genatlas (Paris)SNORD3E
WikiGenes109617015
SOURCE (Princeton)SNORD3E
Genetics Home Reference (NIH)SNORD3E
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD3E  -     chrX:70846081-70846295 -  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD3E  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD3E - Xq13.1 [CytoView hg19]  SNORD3E - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBISNORD3E [Mapview hg19]  SNORD3E [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD3E
Gene ExpressionSNORD3E [ NCBI-GEO ]   SNORD3E [ EBI - ARRAY_EXPRESS ]   SNORD3E [ SEEK ]   SNORD3E [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD3E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109617015
GTEX Portal (Tissue expression)SNORD3E
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD3E
DMDM Disease mutations109617015
Blocks (Seattle)SNORD3E
Protein Interaction databases
BioGRIDSNORD3E
STRING (EMBL)SNORD3E
ZODIACSNORD3E
Ontologies - Pathways
Huge Navigator SNORD3E [HugePedia]
snp3D : Map Gene to Disease109617015
BioCentury BCIQSNORD3E
ClinGenSNORD3E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109617015
Clinical trialSNORD3E
Miscellaneous
canSAR (ICR)SNORD3E (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD3E
EVEXSNORD3E
GoPubMedSNORD3E
iHOPSNORD3E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:29:55 CET 2017

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