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SNORD3K (small nucleolar RNA, C/D box 3K)

Identity

Other alias-
HGNC (Hugo) SNORD3K
LocusID (NCBI) 109617017
Atlas_Id 79791
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 169816279 and ends at 169816378 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD3K   52244
Cards
Entrez_Gene (NCBI)SNORD3K  109617017  small nucleolar RNA, C/D box 3K
Aliases
GeneCards (Weizmann)SNORD3K
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:169816279-169816378 [Contig_View]  SNORD3K [Vega]
TCGA cBioPortalSNORD3K
AceView (NCBI)SNORD3K
Genatlas (Paris)SNORD3K
WikiGenes109617017
SOURCE (Princeton)SNORD3K
Genetics Home Reference (NIH)SNORD3K
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD3K  -     chr2:169816279-169816378 +  2q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD3K  -     2q31.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD3K - 2q31.1 [CytoView hg19]  SNORD3K - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBISNORD3K [Mapview hg19]  SNORD3K [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD3K
Gene ExpressionSNORD3K [ NCBI-GEO ]   SNORD3K [ EBI - ARRAY_EXPRESS ]   SNORD3K [ SEEK ]   SNORD3K [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD3K [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109617017
GTEX Portal (Tissue expression)SNORD3K
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD3K
DMDM Disease mutations109617017
Blocks (Seattle)SNORD3K
Protein Interaction databases
BioGRIDSNORD3K
STRING (EMBL)SNORD3K
ZODIACSNORD3K
Ontologies - Pathways
Huge Navigator SNORD3K [HugePedia]
snp3D : Map Gene to Disease109617017
BioCentury BCIQSNORD3K
ClinGenSNORD3K
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109617017
Clinical trialSNORD3K
Miscellaneous
canSAR (ICR)SNORD3K (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD3K
EVEXSNORD3K
GoPubMedSNORD3K
iHOPSNORD3K
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:06:25 CET 2017

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