Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD3P3 (small nucleolar RNA, C/D box 3 pseudogene 3)

Identity

Alias_namesRNU3P3
RNA, U3 small nucleolar pseudogene 3
Alias_symbol (synonym)U3
U3.5
u3.7
Other alias
HGNC (Hugo) SNORD3P3
LocusID (NCBI) 26843
Atlas_Id 79082
Location 14q31.3  [Link to chromosome band 14q31]
Location_base_pair Starts at 85271932 and ends at 85272061 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD3P3   10177
Cards
Entrez_Gene (NCBI)SNORD3P3  26843  small nucleolar RNA, C/D box 3 pseudogene 3
AliasesRNU3P3; U3; U3.5; u3.7
GeneCards (Weizmann)SNORD3P3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:85271932-85272061 [Contig_View]  SNORD3P3 [Vega]
TCGA cBioPortalSNORD3P3
AceView (NCBI)SNORD3P3
Genatlas (Paris)SNORD3P3
WikiGenes26843
SOURCE (Princeton)SNORD3P3
Genetics Home Reference (NIH)SNORD3P3
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD3P3  -     chr14:85271932-85272061 +  14q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD3P3  -     14q31.3   [Description]    (hg19-Feb_2009)
EnsemblSNORD3P3 - 14q31.3 [CytoView hg19]  SNORD3P3 - 14q31.3 [CytoView hg38]
Mapping of homologs : NCBISNORD3P3 [Mapview hg19]  SNORD3P3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD3P3
Gene ExpressionSNORD3P3 [ NCBI-GEO ]   SNORD3P3 [ EBI - ARRAY_EXPRESS ]   SNORD3P3 [ SEEK ]   SNORD3P3 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD3P3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26843
GTEX Portal (Tissue expression)SNORD3P3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD3P3
DMDM Disease mutations26843
Blocks (Seattle)SNORD3P3
Protein Interaction databases
BioGRIDSNORD3P3
STRING (EMBL)SNORD3P3
ZODIACSNORD3P3
Ontologies - Pathways
Huge Navigator SNORD3P3 [HugePedia]
snp3D : Map Gene to Disease26843
BioCentury BCIQSNORD3P3
ClinGenSNORD3P3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26843
Chemical/Pharm GKB GenePA34543
Clinical trialSNORD3P3
Miscellaneous
canSAR (ICR)SNORD3P3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD3P3
EVEXSNORD3P3
GoPubMedSNORD3P3
iHOPSNORD3P3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:30:39 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.