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SNORD42A (small nucleolar RNA, C/D box 42A)

Identity

Alias_namesRNU42A
RNA, U42A small nuclear
Alias_symbol (synonym)U42
Other aliasU42A
HGNC (Hugo) SNORD42A
LocusID (NCBI) 26809
Atlas_Id 73946
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 27050447 and ends at 27050509 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD42A   10180
Cards
Entrez_Gene (NCBI)SNORD42A  26809  small nucleolar RNA, C/D box 42A
AliasesRNU42A; U42; U42A
GeneCards (Weizmann)SNORD42A
Ensembl hg19 (Hinxton) [Gene_View]  chr17:27050447-27050509 [Contig_View]  SNORD42A [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:27050447-27050509 [Contig_View]  SNORD42A [Vega]
TCGA cBioPortalSNORD42A
AceView (NCBI)SNORD42A
Genatlas (Paris)SNORD42A
WikiGenes26809
SOURCE (Princeton)SNORD42A
Genetics Home Reference (NIH)SNORD42A
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD42A  -     chr17:27050447-27050509 +  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD42A  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD42A - 17q11.2 [CytoView hg19]  SNORD42A - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD42A [Mapview hg19]  SNORD42A [Mapview hg38]
Gene and transcription
Genbank (Entrez)X96641
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)SNORD42A
Gene ExpressionSNORD42A [ NCBI-GEO ]   SNORD42A [ EBI - ARRAY_EXPRESS ]   SNORD42A [ SEEK ]   SNORD42A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD42A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26809
GTEX Portal (Tissue expression)SNORD42A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD42A
DMDM Disease mutations26809
Blocks (Seattle)SNORD42A
Protein Interaction databases
BioGRIDSNORD42A
STRING (EMBL)SNORD42A
ZODIACSNORD42A
Ontologies - Pathways
Huge Navigator SNORD42A [HugePedia]
snp3D : Map Gene to Disease26809
BioCentury BCIQSNORD42A
ClinGenSNORD42A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26809
Chemical/Pharm GKB GenePA34547
Clinical trialSNORD42A
Miscellaneous
canSAR (ICR)SNORD42A (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD42A
EVEXSNORD42A
GoPubMedSNORD42A
iHOPSNORD42A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:44 CET 2017

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