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SNORD42B (small nucleolar RNA, C/D box 42B)

Identity

Alias_namesRNU42B
RNA, U42B small nucleolar
Alias_symbol (synonym)U42B
Other alias
HGNC (Hugo) SNORD42B
LocusID (NCBI) 26808
Atlas_Id 73947
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 27047568 and ends at 27047634 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD42B   10181
Cards
Entrez_Gene (NCBI)SNORD42B  26808  small nucleolar RNA, C/D box 42B
AliasesRNU42B; U42B
GeneCards (Weizmann)SNORD42B
Ensembl hg19 (Hinxton) [Gene_View]  chr17:27047568-27047634 [Contig_View]  SNORD42B [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:27047568-27047634 [Contig_View]  SNORD42B [Vega]
TCGA cBioPortalSNORD42B
AceView (NCBI)SNORD42B
Genatlas (Paris)SNORD42B
WikiGenes26808
SOURCE (Princeton)SNORD42B
Genetics Home Reference (NIH)SNORD42B
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD42B  -     chr17:27047568-27047634 +  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD42B  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD42B - 17q11.2 [CytoView hg19]  SNORD42B - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD42B [Mapview hg19]  SNORD42B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)SNORD42B
Gene ExpressionSNORD42B [ NCBI-GEO ]   SNORD42B [ EBI - ARRAY_EXPRESS ]   SNORD42B [ SEEK ]   SNORD42B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD42B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26808
GTEX Portal (Tissue expression)SNORD42B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD42B
DMDM Disease mutations26808
Blocks (Seattle)SNORD42B
Protein Interaction databases
BioGRIDSNORD42B
STRING (EMBL)SNORD42B
ZODIACSNORD42B
Ontologies - Pathways
Huge Navigator SNORD42B [HugePedia]
snp3D : Map Gene to Disease26808
BioCentury BCIQSNORD42B
ClinGenSNORD42B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26808
Chemical/Pharm GKB GenePA34548
Clinical trialSNORD42B
Miscellaneous
canSAR (ICR)SNORD42B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD42B
EVEXSNORD42B
GoPubMedSNORD42B
iHOPSNORD42B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:44 CET 2017

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