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SNORD43 (small nucleolar RNA, C/D box 43)

Identity

Alias_namesRNU43
RNA, U43 small nuclear
Alias_symbol (synonym)U43
Other alias
HGNC (Hugo) SNORD43
LocusID (NCBI) 26807
Atlas_Id 73948
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 39319052 and ends at 39319113 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD43   10182
Cards
Entrez_Gene (NCBI)SNORD43  26807  small nucleolar RNA, C/D box 43
AliasesRNU43; U43
GeneCards (Weizmann)SNORD43
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:39319052-39319113 [Contig_View]  SNORD43 [Vega]
TCGA cBioPortalSNORD43
AceView (NCBI)SNORD43
Genatlas (Paris)SNORD43
WikiGenes26807
SOURCE (Princeton)SNORD43
Genetics Home Reference (NIH)SNORD43
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD43  -     chr22:39319052-39319113 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD43  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD43 - 22q13.1 [CytoView hg19]  SNORD43 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBISNORD43 [Mapview hg19]  SNORD43 [Mapview hg38]
OMIM611068   
Gene and transcription
Genbank (Entrez)X96642
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD43
Gene ExpressionSNORD43 [ NCBI-GEO ]   SNORD43 [ EBI - ARRAY_EXPRESS ]   SNORD43 [ SEEK ]   SNORD43 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD43 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26807
GTEX Portal (Tissue expression)SNORD43
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD43
DMDM Disease mutations26807
Blocks (Seattle)SNORD43
Protein Interaction databases
BioGRIDSNORD43
STRING (EMBL)SNORD43
ZODIACSNORD43
Ontologies - Pathways
Huge Navigator SNORD43 [HugePedia]
snp3D : Map Gene to Disease26807
BioCentury BCIQSNORD43
ClinGenSNORD43
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26807
Chemical/Pharm GKB GenePA34549
Clinical trialSNORD43
Miscellaneous
canSAR (ICR)SNORD43 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD43
EVEXSNORD43
GoPubMedSNORD43
iHOPSNORD43
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:44:24 CET 2017

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