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SNORD45A (small nucleolar RNA, C/D box 45A)

Identity

Alias_namesRNU45A
RNA, U45A small nuclear
Alias_symbol (synonym)U45a
Other alias
HGNC (Hugo) SNORD45A
LocusID (NCBI) 26805
Atlas_Id 73950
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 75787889 and ends at 75787972 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD45A   10184
Cards
Entrez_Gene (NCBI)SNORD45A  26805  small nucleolar RNA, C/D box 45A
AliasesRNU45A; U45a
GeneCards (Weizmann)SNORD45A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:75787889-75787972 [Contig_View]  SNORD45A [Vega]
TCGA cBioPortalSNORD45A
AceView (NCBI)SNORD45A
Genatlas (Paris)SNORD45A
WikiGenes26805
SOURCE (Princeton)SNORD45A
Genetics Home Reference (NIH)SNORD45A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD45A  -     chr1:75787889-75787972 +  1p31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD45A  -     1p31.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD45A - 1p31.1 [CytoView hg19]  SNORD45A - 1p31.1 [CytoView hg38]
Mapping of homologs : NCBISNORD45A [Mapview hg19]  SNORD45A [Mapview hg38]
Gene and transcription
Genbank (Entrez)X96644
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD45A
Gene ExpressionSNORD45A [ NCBI-GEO ]   SNORD45A [ EBI - ARRAY_EXPRESS ]   SNORD45A [ SEEK ]   SNORD45A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD45A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26805
GTEX Portal (Tissue expression)SNORD45A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD45A
DMDM Disease mutations26805
Blocks (Seattle)SNORD45A
Protein Interaction databases
BioGRIDSNORD45A
STRING (EMBL)SNORD45A
ZODIACSNORD45A
Ontologies - Pathways
Huge Navigator SNORD45A [HugePedia]
snp3D : Map Gene to Disease26805
BioCentury BCIQSNORD45A
ClinGenSNORD45A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26805
Chemical/Pharm GKB GenePA34551
Clinical trialSNORD45A
Miscellaneous
canSAR (ICR)SNORD45A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD45A
EVEXSNORD45A
GoPubMedSNORD45A
iHOPSNORD45A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:15:23 CET 2017

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