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SNORD46 (small nucleolar RNA, C/D box 46)

Identity

Alias_namesRNU46
RNU40
RNA, U46 small nuclear
RNA, U40 small nuclear
Alias_symbol (synonym)U46
U40
Other alias
HGNC (Hugo) SNORD46
LocusID (NCBI) 94161
Atlas_Id 73953
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 45242164 and ends at 45242261 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD46   10186
Cards
Entrez_Gene (NCBI)SNORD46  94161  small nucleolar RNA, C/D box 46
AliasesRNU40; RNU46; U40; U46
GeneCards (Weizmann)SNORD46
Ensembl hg19 (Hinxton) [Gene_View]  chr1:45242164-45242261 [Contig_View]  SNORD46 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:45242164-45242261 [Contig_View]  SNORD46 [Vega]
TCGA cBioPortalSNORD46
AceView (NCBI)SNORD46
Genatlas (Paris)SNORD46
WikiGenes94161
SOURCE (Princeton)SNORD46
Genetics Home Reference (NIH)SNORD46
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD46  -     chr1:45242164-45242261 +  1p34.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD46  -     1p34.1   [Description]    (hg38-Dec_2013)
EnsemblSNORD46 - 1p34.1 [CytoView hg19]  SNORD46 - 1p34.1 [CytoView hg38]
Mapping of homologs : NCBISNORD46 [Mapview hg19]  SNORD46 [Mapview hg38]
Gene and transcription
Genbank (Entrez)X96646
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)SNORD46
Gene ExpressionSNORD46 [ NCBI-GEO ]   SNORD46 [ EBI - ARRAY_EXPRESS ]   SNORD46 [ SEEK ]   SNORD46 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD46 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)94161
GTEX Portal (Tissue expression)SNORD46
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD46
DMDM Disease mutations94161
Blocks (Seattle)SNORD46
Protein Interaction databases
BioGRIDSNORD46
STRING (EMBL)SNORD46
ZODIACSNORD46
Ontologies - Pathways
Huge Navigator SNORD46 [HugePedia]
snp3D : Map Gene to Disease94161
BioCentury BCIQSNORD46
ClinGenSNORD46
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94161
Chemical/Pharm GKB GenePA34553
Clinical trialSNORD46
Miscellaneous
canSAR (ICR)SNORD46 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD46
EVEXSNORD46
GoPubMedSNORD46
iHOPSNORD46
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:45 CET 2017

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