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SNORD47 (small nucleolar RNA, C/D box 47)

Identity

Alias_namesRNU47
RNA, U47 small nuclear
Alias_symbol (synonym)U47
Other alias
HGNC (Hugo) SNORD47
LocusID (NCBI) 26802
Atlas_Id 73954
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 173833507 and ends at 173833583 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD47   10187
Cards
Entrez_Gene (NCBI)SNORD47  26802  small nucleolar RNA, C/D box 47
AliasesRNU47; U47
GeneCards (Weizmann)SNORD47
Ensembl hg19 (Hinxton) [Gene_View]  chr1:173833507-173833583 [Contig_View]  SNORD47 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:173833507-173833583 [Contig_View]  SNORD47 [Vega]
TCGA cBioPortalSNORD47
AceView (NCBI)SNORD47
Genatlas (Paris)SNORD47
WikiGenes26802
SOURCE (Princeton)SNORD47
Genetics Home Reference (NIH)SNORD47
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD47  -     chr1:173833507-173833583 -  1q25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD47  -     1q25.1   [Description]    (hg38-Dec_2013)
EnsemblSNORD47 - 1q25.1 [CytoView hg19]  SNORD47 - 1q25.1 [CytoView hg38]
Mapping of homologs : NCBISNORD47 [Mapview hg19]  SNORD47 [Mapview hg38]
Gene and transcription
Genbank (Entrez)X96647
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)SNORD47
Gene ExpressionSNORD47 [ NCBI-GEO ]   SNORD47 [ EBI - ARRAY_EXPRESS ]   SNORD47 [ SEEK ]   SNORD47 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD47 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26802
GTEX Portal (Tissue expression)SNORD47
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD47
DMDM Disease mutations26802
Blocks (Seattle)SNORD47
Protein Interaction databases
BioGRIDSNORD47
STRING (EMBL)SNORD47
ZODIACSNORD47
Ontologies - Pathways
Huge Navigator SNORD47 [HugePedia]
snp3D : Map Gene to Disease26802
BioCentury BCIQSNORD47
ClinGenSNORD47
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26802
Chemical/Pharm GKB GenePA34554
Clinical trialSNORD47
Miscellaneous
canSAR (ICR)SNORD47 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD47
EVEXSNORD47
GoPubMedSNORD47
iHOPSNORD47
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:45 CET 2017

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