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SNORD49A (small nucleolar RNA, C/D box 49A)

Identity

Alias_namesRNU49
RNA, U49 small nuclear
Alias_symbol (synonym)U49
U49A
Other alias
HGNC (Hugo) SNORD49A
LocusID (NCBI) 26800
Atlas_Id 73956
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 16440036 and ends at 16440106 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD49A   10189
Cards
Entrez_Gene (NCBI)SNORD49A  26800  small nucleolar RNA, C/D box 49A
AliasesRNU49; U49; U49A
GeneCards (Weizmann)SNORD49A
Ensembl hg19 (Hinxton)ENSG00000277370 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277370 [Gene_View]  chr17:16440036-16440106 [Contig_View]  SNORD49A [Vega]
ICGC DataPortalENSG00000277370
TCGA cBioPortalSNORD49A
AceView (NCBI)SNORD49A
Genatlas (Paris)SNORD49A
WikiGenes26800
SOURCE (Princeton)SNORD49A
Genetics Home Reference (NIH)SNORD49A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD49A  -     chr17:16440036-16440106 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD49A  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblSNORD49A - 17p11.2 [CytoView hg19]  SNORD49A - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD49A [Mapview hg19]  SNORD49A [Mapview hg38]
Gene and transcription
Genbank (Entrez)X96649
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD49A
Alternative Splicing GalleryENSG00000277370
Gene ExpressionSNORD49A [ NCBI-GEO ]   SNORD49A [ EBI - ARRAY_EXPRESS ]   SNORD49A [ SEEK ]   SNORD49A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD49A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26800
GTEX Portal (Tissue expression)SNORD49A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD49A
DMDM Disease mutations26800
Blocks (Seattle)SNORD49A
Human Protein AtlasENSG00000277370
Protein Interaction databases
FunCoupENSG00000277370
BioGRIDSNORD49A
STRING (EMBL)SNORD49A
ZODIACSNORD49A
Ontologies - Pathways
Huge Navigator SNORD49A [HugePedia]
snp3D : Map Gene to Disease26800
BioCentury BCIQSNORD49A
ClinGenSNORD49A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26800
Chemical/Pharm GKB GenePA34556
Clinical trialSNORD49A
Miscellaneous
canSAR (ICR)SNORD49A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD49A
EVEXSNORD49A
GoPubMedSNORD49A
iHOPSNORD49A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:39:50 CEST 2017

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