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SNORD50B (small nucleolar RNA, C/D box 50B)

Identity

Alias_symbol (synonym)U50B
Other aliasU50'
HGNC (Hugo) SNORD50B
LocusID (NCBI) 692088
Atlas_Id 55765
Location 6q14.3  [Link to chromosome band 6q14]
Location_base_pair Starts at 85677589 and ends at 85677659 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD50B   32722
Cards
Entrez_Gene (NCBI)SNORD50B  692088  small nucleolar RNA, C/D box 50B
AliasesU50'; U50B
GeneCards (Weizmann)SNORD50B
Ensembl hg19 (Hinxton)ENSG00000275072 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275072 [Gene_View]  ENSG00000275072 [Sequence]  chr6:85677589-85677659 [Contig_View]  SNORD50B [Vega]
ICGC DataPortalENSG00000275072
TCGA cBioPortalSNORD50B
AceView (NCBI)SNORD50B
Genatlas (Paris)SNORD50B
WikiGenes692088
SOURCE (Princeton)SNORD50B
Genetics Home Reference (NIH)SNORD50B
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD50B  -     chr6:85677589-85677659 -  6q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD50B  -     6q14.3   [Description]    (hg19-Feb_2009)
EnsemblSNORD50B - 6q14.3 [CytoView hg19]  SNORD50B - 6q14.3 [CytoView hg38]
Mapping of homologs : NCBISNORD50B [Mapview hg19]  SNORD50B [Mapview hg38]
OMIM613264   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD50B
Alternative Splicing GalleryENSG00000275072
Gene ExpressionSNORD50B [ NCBI-GEO ]   SNORD50B [ EBI - ARRAY_EXPRESS ]   SNORD50B [ SEEK ]   SNORD50B [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD50B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692088
GTEX Portal (Tissue expression)SNORD50B
Human Protein AtlasENSG00000275072-SNORD50B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD50B
DMDM Disease mutations692088
Blocks (Seattle)SNORD50B
Human Protein Atlas [tissue]ENSG00000275072-SNORD50B [tissue]
Protein Interaction databases
FunCoupENSG00000275072
BioGRIDSNORD50B
STRING (EMBL)SNORD50B
ZODIACSNORD50B
Ontologies - Pathways
Huge Navigator SNORD50B [HugePedia]
snp3D : Map Gene to Disease692088
BioCentury BCIQSNORD50B
ClinGenSNORD50B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692088
Chemical/Pharm GKB GenePA145007798
Clinical trialSNORD50B
Miscellaneous
canSAR (ICR)SNORD50B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD50B
EVEXSNORD50B
GoPubMedSNORD50B
iHOPSNORD50B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:40:54 CET 2018

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