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SNORD53 (small nucleolar RNA, C/D box 53)

Identity

Alias_namesRNU53
RNA, U53 small nuclear
Alias_symbol (synonym)U53
SNORD53A
Other alias
HGNC (Hugo) SNORD53
LocusID (NCBI) 26796
Atlas_Id 73964
Location 2p23.2  [Link to chromosome band 2p23]
Location_base_pair Starts at 29149933 and ends at 29150008 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD53   10203
Cards
Entrez_Gene (NCBI)SNORD53  26796  small nucleolar RNA, C/D box 53
AliasesRNU53; U53
GeneCards (Weizmann)SNORD53
Ensembl hg19 (Hinxton) [Gene_View]  chr2:29149933-29150008 [Contig_View]  SNORD53 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:29149933-29150008 [Contig_View]  SNORD53 [Vega]
TCGA cBioPortalSNORD53
AceView (NCBI)SNORD53
Genatlas (Paris)SNORD53
WikiGenes26796
SOURCE (Princeton)SNORD53
Genetics Home Reference (NIH)SNORD53
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD53  -     chr2:29149933-29150008 +  2p23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD53  -     2p23.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD53 - 2p23.2 [CytoView hg19]  SNORD53 - 2p23.2 [CytoView hg38]
Mapping of homologs : NCBISNORD53 [Mapview hg19]  SNORD53 [Mapview hg38]
Gene and transcription
Genbank (Entrez)X96652
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)SNORD53
Gene ExpressionSNORD53 [ NCBI-GEO ]   SNORD53 [ EBI - ARRAY_EXPRESS ]   SNORD53 [ SEEK ]   SNORD53 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD53 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26796
GTEX Portal (Tissue expression)SNORD53
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD53
DMDM Disease mutations26796
Blocks (Seattle)SNORD53
Protein Interaction databases
BioGRIDSNORD53
STRING (EMBL)SNORD53
ZODIACSNORD53
Ontologies - Pathways
Huge Navigator SNORD53 [HugePedia]
snp3D : Map Gene to Disease26796
BioCentury BCIQSNORD53
ClinGenSNORD53
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26796
Chemical/Pharm GKB GenePA34570
Clinical trialSNORD53
Miscellaneous
canSAR (ICR)SNORD53 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD53
EVEXSNORD53
GoPubMedSNORD53
iHOPSNORD53
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:47 CET 2017

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