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SNORD55 (small nucleolar RNA, C/D box 55)

Identity

Alias_namesRNU55
RNU39
SNORD39
RNA, U55 small nuclear
RNA, U39 small nucleolar
small nucleolar RNA, C/D box 39
Alias_symbol (synonym)U55
U39
Other alias
HGNC (Hugo) SNORD55
LocusID (NCBI) 26811
Atlas_Id 73966
Location 1p34.1  [Link to chromosome band 1p34]
Location_base_pair Starts at 45241537 and ends at 45241610 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD55   10205
Cards
Entrez_Gene (NCBI)SNORD55  26811  small nucleolar RNA, C/D box 55
AliasesRNU39; RNU55; SNORD39; U39; 
U55
GeneCards (Weizmann)SNORD55
Ensembl hg19 (Hinxton) [Gene_View]  chr1:45241537-45241610 [Contig_View]  SNORD55 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:45241537-45241610 [Contig_View]  SNORD55 [Vega]
TCGA cBioPortalSNORD55
AceView (NCBI)SNORD55
Genatlas (Paris)SNORD55
WikiGenes26811
SOURCE (Princeton)SNORD55
Genetics Home Reference (NIH)SNORD55
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD55  -     chr1:45241537-45241610 +  1p34.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD55  -     1p34.1   [Description]    (hg38-Dec_2013)
EnsemblSNORD55 - 1p34.1 [CytoView hg19]  SNORD55 - 1p34.1 [CytoView hg38]
Mapping of homologs : NCBISNORD55 [Mapview hg19]  SNORD55 [Mapview hg38]
Gene and transcription
Genbank (Entrez)X96654
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)SNORD55
Gene ExpressionSNORD55 [ NCBI-GEO ]   SNORD55 [ EBI - ARRAY_EXPRESS ]   SNORD55 [ SEEK ]   SNORD55 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD55 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26811
GTEX Portal (Tissue expression)SNORD55
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD55
DMDM Disease mutations26811
Blocks (Seattle)SNORD55
Protein Interaction databases
BioGRIDSNORD55
STRING (EMBL)SNORD55
ZODIACSNORD55
Ontologies - Pathways
Huge Navigator SNORD55 [HugePedia]
snp3D : Map Gene to Disease26811
BioCentury BCIQSNORD55
ClinGenSNORD55
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26811
Chemical/Pharm GKB GenePA34572
Clinical trialSNORD55
Miscellaneous
canSAR (ICR)SNORD55 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD55
EVEXSNORD55
GoPubMedSNORD55
iHOPSNORD55
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:48 CET 2017

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