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SNORD6 (small nucleolar RNA, C/D box 6)

Identity

Alias (NCBI)mgh28S-2412
HGNC (Hugo) SNORD6
HGNC Alias symbmgh28S-2412
LocusID (NCBI) 692075
Atlas_Id 73975
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 93731503 and ends at 93731573 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SNORD6 (11q21) / FN1 (2q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SNORD6   32703
Cards
Entrez_Gene (NCBI)SNORD6    small nucleolar RNA, C/D box 6
Aliasesmgh28S-2412
GeneCards (Weizmann)SNORD6
Ensembl hg19 (Hinxton)ENSG00000202314 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000202314 [Gene_View]  ENSG00000202314 [Sequence]  chr11:93731503-93731573 [Contig_View]  SNORD6 [Vega]
ICGC DataPortalENSG00000202314
TCGA cBioPortalSNORD6
AceView (NCBI)SNORD6
Genatlas (Paris)SNORD6
SOURCE (Princeton)SNORD6
Genetics Home Reference (NIH)SNORD6
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD6  -     chr11:93731503-93731573 -  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD6  -     11q21   [Description]    (hg19-Feb_2009)
GoldenPathSNORD6 - 11q21 [CytoView hg19]  SNORD6 - 11q21 [CytoView hg38]
ImmunoBaseENSG00000202314
Genome Data Viewer NCBISNORD6 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AJ609489
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD6
Gene ExpressionSNORD6 [ NCBI-GEO ]   SNORD6 [ EBI - ARRAY_EXPRESS ]   SNORD6 [ SEEK ]   SNORD6 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD6 [ Firebrowse - Broad ]
GenevisibleExpression of SNORD6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)692075
GTEX Portal (Tissue expression)SNORD6
Human Protein AtlasENSG00000202314-SNORD6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD6
Human Protein Atlas [tissue]ENSG00000202314-SNORD6 [tissue]
Protein Interaction databases
BioGRIDSNORD6
STRING (EMBL)SNORD6
ZODIACSNORD6
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNORD6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:23:21 CEST 2021

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