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SNORD6 (small nucleolar RNA, C/D box 6)

Identity

Alias_symbol (synonym)mgh28S-2412
Other alias
HGNC (Hugo) SNORD6
LocusID (NCBI) 692075
Atlas_Id 73975
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 93731503 and ends at 93731573 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SNORD6 (11q21) / FN1 (2q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD6   32703
Cards
Entrez_Gene (NCBI)SNORD6  692075  small nucleolar RNA, C/D box 6
Aliasesmgh28S-2412
GeneCards (Weizmann)SNORD6
Ensembl hg19 (Hinxton)ENSG00000202314 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000202314 [Gene_View]  chr11:93731503-93731573 [Contig_View]  SNORD6 [Vega]
ICGC DataPortalENSG00000202314
TCGA cBioPortalSNORD6
AceView (NCBI)SNORD6
Genatlas (Paris)SNORD6
WikiGenes692075
SOURCE (Princeton)SNORD6
Genetics Home Reference (NIH)SNORD6
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD6  -     chr11:93731503-93731573 -  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD6  -     11q21   [Description]    (hg19-Feb_2009)
EnsemblSNORD6 - 11q21 [CytoView hg19]  SNORD6 - 11q21 [CytoView hg38]
Mapping of homologs : NCBISNORD6 [Mapview hg19]  SNORD6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ609489
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD6
Alternative Splicing GalleryENSG00000202314
Gene ExpressionSNORD6 [ NCBI-GEO ]   SNORD6 [ EBI - ARRAY_EXPRESS ]   SNORD6 [ SEEK ]   SNORD6 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692075
GTEX Portal (Tissue expression)SNORD6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD6
DMDM Disease mutations692075
Blocks (Seattle)SNORD6
Human Protein AtlasENSG00000202314
Protein Interaction databases
FunCoupENSG00000202314
BioGRIDSNORD6
STRING (EMBL)SNORD6
ZODIACSNORD6
Ontologies - Pathways
Huge Navigator SNORD6 [HugePedia]
snp3D : Map Gene to Disease692075
BioCentury BCIQSNORD6
ClinGenSNORD6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692075
Chemical/Pharm GKB GenePA145007804
Clinical trialSNORD6
Miscellaneous
canSAR (ICR)SNORD6 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD6
EVEXSNORD6
GoPubMedSNORD6
iHOPSNORD6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:39:52 CEST 2017

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