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SNORD65C (small nucleolar RNA, C/D box 65C)

Identity

Other alias-
HGNC (Hugo) SNORD65C
LocusID (NCBI) 109616981
Atlas_Id 79540
Location 7p15.3  [Link to chromosome band 7p15]
Location_base_pair Starts at 23396446 and ends at 23396516 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD65C   52232
Cards
Entrez_Gene (NCBI)SNORD65C  109616981  small nucleolar RNA, C/D box 65C
Aliases
GeneCards (Weizmann)SNORD65C
Ensembl hg19 (Hinxton)ENSG00000212264 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000212264 [Gene_View]  chr7:23396446-23396516 [Contig_View]  SNORD65C [Vega]
ICGC DataPortalENSG00000212264
TCGA cBioPortalSNORD65C
AceView (NCBI)SNORD65C
Genatlas (Paris)SNORD65C
WikiGenes109616981
SOURCE (Princeton)SNORD65C
Genetics Home Reference (NIH)SNORD65C
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD65C  -     chr7:23396446-23396516 +  7p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD65C  -     7p15.3   [Description]    (hg19-Feb_2009)
EnsemblSNORD65C - 7p15.3 [CytoView hg19]  SNORD65C - 7p15.3 [CytoView hg38]
Mapping of homologs : NCBISNORD65C [Mapview hg19]  SNORD65C [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD65C
Alternative Splicing GalleryENSG00000212264
Gene ExpressionSNORD65C [ NCBI-GEO ]   SNORD65C [ EBI - ARRAY_EXPRESS ]   SNORD65C [ SEEK ]   SNORD65C [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD65C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109616981
GTEX Portal (Tissue expression)SNORD65C
Human Protein AtlasENSG00000212264-SNORD65C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD65C
DMDM Disease mutations109616981
Blocks (Seattle)SNORD65C
Human Protein Atlas [tissue]ENSG00000212264-SNORD65C [tissue]
Protein Interaction databases
FunCoupENSG00000212264
BioGRIDSNORD65C
STRING (EMBL)SNORD65C
ZODIACSNORD65C
Ontologies - Pathways
Huge Navigator SNORD65C [HugePedia]
snp3D : Map Gene to Disease109616981
BioCentury BCIQSNORD65C
ClinGenSNORD65C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109616981
Clinical trialSNORD65C
Miscellaneous
canSAR (ICR)SNORD65C (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD65C
EVEXSNORD65C
GoPubMedSNORD65C
iHOPSNORD65C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:15 CET 2017

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