Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD77 (small nucleolar RNA, C/D box 77)

Identity

Alias_symbol (synonym)U77
SNORD77A
Other alias
HGNC (Hugo) SNORD77
LocusID (NCBI) 692197
Atlas_Id 73995
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 173866301 and ends at 173866370 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD77   32737
Cards
Entrez_Gene (NCBI)SNORD77  692197  small nucleolar RNA, C/D box 77
AliasesSNORD77A; U77
GeneCards (Weizmann)SNORD77
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:173866301-173866370 [Contig_View]  SNORD77 [Vega]
TCGA cBioPortalSNORD77
AceView (NCBI)SNORD77
Genatlas (Paris)SNORD77
WikiGenes692197
SOURCE (Princeton)SNORD77
Genetics Home Reference (NIH)SNORD77
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD77  -     chr1:173866301-173866370 -  1q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD77  -     1q25.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD77 - 1q25.1 [CytoView hg19]  SNORD77 - 1q25.1 [CytoView hg38]
Mapping of homologs : NCBISNORD77 [Mapview hg19]  SNORD77 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD77
Gene ExpressionSNORD77 [ NCBI-GEO ]   SNORD77 [ EBI - ARRAY_EXPRESS ]   SNORD77 [ SEEK ]   SNORD77 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD77 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692197
GTEX Portal (Tissue expression)SNORD77
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD77
DMDM Disease mutations692197
Blocks (Seattle)SNORD77
Protein Interaction databases
BioGRIDSNORD77
STRING (EMBL)SNORD77
ZODIACSNORD77
Ontologies - Pathways
Huge Navigator SNORD77 [HugePedia]
snp3D : Map Gene to Disease692197
BioCentury BCIQSNORD77
ClinGenSNORD77
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692197
Chemical/Pharm GKB GenePA145007772
Clinical trialSNORD77
Miscellaneous
canSAR (ICR)SNORD77 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD77
EVEXSNORD77
GoPubMedSNORD77
iHOPSNORD77
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:03:08 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.