Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SNORD8 (small nucleolar RNA, C/D box 8)

Identity

Alias_namesRNU6C
RNA, U6C small nucleolar
Alias_symbol (synonym)mgU6-53
Other alias
HGNC (Hugo) SNORD8
LocusID (NCBI) 319103
Atlas_Id 73998
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21865452 and ends at 21865560 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD8   20159
Cards
Entrez_Gene (NCBI)SNORD8  319103  small nucleolar RNA, C/D box 8
AliasesRNU6C; mgU6-53
GeneCards (Weizmann)SNORD8
Ensembl hg19 (Hinxton) [Gene_View]  chr14:21865452-21865560 [Contig_View]  SNORD8 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:21865452-21865560 [Contig_View]  SNORD8 [Vega]
TCGA cBioPortalSNORD8
AceView (NCBI)SNORD8
Genatlas (Paris)SNORD8
WikiGenes319103
SOURCE (Princeton)SNORD8
Genetics Home Reference (NIH)SNORD8
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD8  -     chr14:21865452-21865560 -  14q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD8  -     14q11.2   [Description]    (hg38-Dec_2013)
EnsemblSNORD8 - 14q11.2 [CytoView hg19]  SNORD8 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBISNORD8 [Mapview hg19]  SNORD8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ243222
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_021249 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)SNORD8
Cluster EST : UnigeneHs.680078 [ NCBI ]
CGAP (NCI)Hs.680078
Gene ExpressionSNORD8 [ NCBI-GEO ]   SNORD8 [ EBI - ARRAY_EXPRESS ]   SNORD8 [ SEEK ]   SNORD8 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)319103
GTEX Portal (Tissue expression)SNORD8
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD8
DMDM Disease mutations319103
Blocks (Seattle)SNORD8
Protein Interaction databases
BioGRIDSNORD8
STRING (EMBL)SNORD8
ZODIACSNORD8
Ontologies - Pathways
Huge Navigator SNORD8 [HugePedia]
snp3D : Map Gene to Disease319103
BioCentury BCIQSNORD8
ClinGenSNORD8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD319103
Chemical/Pharm GKB GenePA134902395
Clinical trialSNORD8
Miscellaneous
canSAR (ICR)SNORD8 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD8
EVEXSNORD8
GoPubMedSNORD8
iHOPSNORD8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:45:55 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.