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SNORD80 (small nucleolar RNA, C/D box 80)

Identity

Alias_namesRNU100
RNA, U100 small nucleolar
Alias_symbol (synonym)Z15
U80
Other alias
HGNC (Hugo) SNORD80
LocusID (NCBI) 26774
Atlas_Id 73999
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 173864833 and ends at 173864903 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD80   10096
Cards
Entrez_Gene (NCBI)SNORD80  26774  small nucleolar RNA, C/D box 80
AliasesRNU100; U80; Z15
GeneCards (Weizmann)SNORD80
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:173864833-173864903 [Contig_View]  SNORD80 [Vega]
TCGA cBioPortalSNORD80
AceView (NCBI)SNORD80
Genatlas (Paris)SNORD80
WikiGenes26774
SOURCE (Princeton)SNORD80
Genetics Home Reference (NIH)SNORD80
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD80  -     chr1:173864833-173864903 -  1q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD80  -     1q25.1   [Description]    (hg19-Feb_2009)
EnsemblSNORD80 - 1q25.1 [CytoView hg19]  SNORD80 - 1q25.1 [CytoView hg38]
Mapping of homologs : NCBISNORD80 [Mapview hg19]  SNORD80 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD80
Gene ExpressionSNORD80 [ NCBI-GEO ]   SNORD80 [ EBI - ARRAY_EXPRESS ]   SNORD80 [ SEEK ]   SNORD80 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD80 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26774
GTEX Portal (Tissue expression)SNORD80
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD80
DMDM Disease mutations26774
Blocks (Seattle)SNORD80
Protein Interaction databases
BioGRIDSNORD80
STRING (EMBL)SNORD80
ZODIACSNORD80
Ontologies - Pathways
Huge Navigator SNORD80 [HugePedia]
snp3D : Map Gene to Disease26774
BioCentury BCIQSNORD80
ClinGenSNORD80
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26774
Chemical/Pharm GKB GenePA34461
Clinical trialSNORD80
Miscellaneous
canSAR (ICR)SNORD80 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD80
EVEXSNORD80
GoPubMedSNORD80
iHOPSNORD80
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:43:23 CEST 2017

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