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SNORD84 (small nucleolar RNA, C/D box 84)

Identity

Alias_symbol (synonym)U84
Other alias
HGNC (Hugo) SNORD84
LocusID (NCBI) 692199
Atlas_Id 74004
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31541101 and ends at 31541178 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD84   32743
Cards
Entrez_Gene (NCBI)SNORD84  692199  small nucleolar RNA, C/D box 84
AliasesU84
GeneCards (Weizmann)SNORD84
Ensembl hg19 (Hinxton)ENSG00000265236 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265236 [Gene_View]  ENSG00000265236 [Sequence]  chr6:31541101-31541178 [Contig_View]  SNORD84 [Vega]
ICGC DataPortalENSG00000265236
TCGA cBioPortalSNORD84
AceView (NCBI)SNORD84
Genatlas (Paris)SNORD84
WikiGenes692199
SOURCE (Princeton)SNORD84
Genetics Home Reference (NIH)SNORD84
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD84  -     chr6:31541101-31541178 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD84  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblSNORD84 - 6p21.33 [CytoView hg19]  SNORD84 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBISNORD84 [Mapview hg19]  SNORD84 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ243199
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)SNORD84
Alternative Splicing GalleryENSG00000265236
Gene ExpressionSNORD84 [ NCBI-GEO ]   SNORD84 [ EBI - ARRAY_EXPRESS ]   SNORD84 [ SEEK ]   SNORD84 [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD84 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692199
GTEX Portal (Tissue expression)SNORD84
Human Protein AtlasENSG00000265236-SNORD84 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD84
DMDM Disease mutations692199
Blocks (Seattle)SNORD84
Human Protein Atlas [tissue]ENSG00000265236-SNORD84 [tissue]
Protein Interaction databases
FunCoupENSG00000265236
BioGRIDSNORD84
STRING (EMBL)SNORD84
ZODIACSNORD84
Ontologies - Pathways
Huge Navigator SNORD84 [HugePedia]
snp3D : Map Gene to Disease692199
BioCentury BCIQSNORD84
ClinGenSNORD84
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692199
Chemical/Pharm GKB GenePA145007774
Clinical trialSNORD84
Miscellaneous
canSAR (ICR)SNORD84 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD84
EVEXSNORD84
GoPubMedSNORD84
iHOPSNORD84
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:32:20 CEST 2018

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