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SNORD88A (small nucleolar RNA, C/D box 88A)

Identity

Alias_symbol (synonym)HBII-180A
Other alias
HGNC (Hugo) SNORD88A
LocusID (NCBI) 692202
Atlas_Id 74008
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 50799439 and ends at 50799535 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD88A   32747
Cards
Entrez_Gene (NCBI)SNORD88A  692202  small nucleolar RNA, C/D box 88A
AliasesHBII-180A
GeneCards (Weizmann)SNORD88A
Ensembl hg19 (Hinxton)ENSG00000221241 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221241 [Gene_View]  chr19:50799439-50799535 [Contig_View]  SNORD88A [Vega]
ICGC DataPortalENSG00000221241
TCGA cBioPortalSNORD88A
AceView (NCBI)SNORD88A
Genatlas (Paris)SNORD88A
WikiGenes692202
SOURCE (Princeton)SNORD88A
Genetics Home Reference (NIH)SNORD88A
Genomic and cartography
GoldenPath hg38 (UCSC)SNORD88A  -     chr19:50799439-50799535 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNORD88A  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblSNORD88A - 19q13.33 [CytoView hg19]  SNORD88A - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBISNORD88A [Mapview hg19]  SNORD88A [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNORD88A
Alternative Splicing GalleryENSG00000221241
Gene ExpressionSNORD88A [ NCBI-GEO ]   SNORD88A [ EBI - ARRAY_EXPRESS ]   SNORD88A [ SEEK ]   SNORD88A [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD88A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692202
GTEX Portal (Tissue expression)SNORD88A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD88A
DMDM Disease mutations692202
Blocks (Seattle)SNORD88A
Human Protein AtlasENSG00000221241
Protein Interaction databases
FunCoupENSG00000221241
BioGRIDSNORD88A
STRING (EMBL)SNORD88A
ZODIACSNORD88A
Ontologies - Pathways
Huge Navigator SNORD88A [HugePedia]
snp3D : Map Gene to Disease692202
BioCentury BCIQSNORD88A
ClinGenSNORD88A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692202
Chemical/Pharm GKB GenePA145007778
Clinical trialSNORD88A
Miscellaneous
canSAR (ICR)SNORD88A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD88A
EVEXSNORD88A
GoPubMedSNORD88A
iHOPSNORD88A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:39:58 CEST 2017

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