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SNORD88C (small nucleolar RNA, C/D box 88C)

Identity

Alias_symbol (synonym)HBII-180C
Other alias
HGNC (Hugo) SNORD88C
LocusID (NCBI) 692204
Atlas_Id 74010
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 51305582 and ends at 51305678 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
C19orf48 (19q13.33) / SNORD88C (19q13.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SNORD88C   32749
Cards
Entrez_Gene (NCBI)SNORD88C  692204  small nucleolar RNA, C/D box 88C
AliasesHBII-180C
GeneCards (Weizmann)SNORD88C
Ensembl hg19 (Hinxton)ENSG00000220988 [Gene_View]  chr19:51305582-51305678 [Contig_View]  SNORD88C [Vega]
Ensembl hg38 (Hinxton)ENSG00000220988 [Gene_View]  chr19:51305582-51305678 [Contig_View]  SNORD88C [Vega]
ICGC DataPortalENSG00000220988
TCGA cBioPortalSNORD88C
AceView (NCBI)SNORD88C
Genatlas (Paris)SNORD88C
WikiGenes692204
SOURCE (Princeton)SNORD88C
Genetics Home Reference (NIH)SNORD88C
Genomic and cartography
GoldenPath hg19 (UCSC)SNORD88C  -     chr19:51305582-51305678 -  19q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SNORD88C  -     19q13.33   [Description]    (hg38-Dec_2013)
EnsemblSNORD88C - 19q13.33 [CytoView hg19]  SNORD88C - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBISNORD88C [Mapview hg19]  SNORD88C [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)SNORD88C
Alternative Splicing GalleryENSG00000220988
Gene ExpressionSNORD88C [ NCBI-GEO ]   SNORD88C [ EBI - ARRAY_EXPRESS ]   SNORD88C [ SEEK ]   SNORD88C [ MEM ]
Gene Expression Viewer (FireBrowse)SNORD88C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692204
GTEX Portal (Tissue expression)SNORD88C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNORD88C
DMDM Disease mutations692204
Blocks (Seattle)SNORD88C
Human Protein AtlasENSG00000220988
Protein Interaction databases
FunCoupENSG00000220988
BioGRIDSNORD88C
STRING (EMBL)SNORD88C
ZODIACSNORD88C
Ontologies - Pathways
Huge Navigator SNORD88C [HugePedia]
snp3D : Map Gene to Disease692204
BioCentury BCIQSNORD88C
ClinGenSNORD88C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692204
Chemical/Pharm GKB GenePA145007780
Clinical trialSNORD88C
Miscellaneous
canSAR (ICR)SNORD88C (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNORD88C
EVEXSNORD88C
GoPubMedSNORD88C
iHOPSNORD88C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:45:57 CET 2017

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