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SNRNP70 (small nuclear ribonucleoprotein U1 subunit 70)

Identity

Alias (NCBI)RNPU1Z
RPU1
SNRP70
Snp1
U1-70K
U170K
U1AP
U1RNP
HGNC (Hugo) SNRNP70
HGNC Alias symbU1-70K
Snp1
HGNC Previous nameRNPU1Z
 RPU1
 SNRP70
HGNC Previous namesmall nuclear ribonucleoprotein 70kDa (RNP antigen)
 small nuclear ribonucleoprotein 70kDa (U1)
 small nuclear ribonucleoprotein, U1 70kDa subunit
LocusID (NCBI) 6625
Atlas_Id 42344
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 49085451 and ends at 49108604 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HDAC10 (22q13.33) / SNRNP70 (19q13.33)SNRNP70 (19q13.33) / GALT (9p13.3)SNRNP70 (19q13.33) / HDAC10 (22q13.33)
SNRNP70 (19q13.33) / IFNAR1 (21q22.11)SNRNP70 (19q13.33) / MRPL52 (14q11.2)SNRNP70 (19q13.33) / RABEP1 (17p13.2)
SNRNP70 (19q13.33) / SNRNP70 (19q13.33)SNRNP70 (19q13.33) / SYNPO2 (4q26)TRIM56 (7q22.1) / SNRNP70 (19q13.33)
SNRNP70 19q13.33 / RABEP1 17p13.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SNRNP70   11150
Cards
Entrez_Gene (NCBI)SNRNP70    small nuclear ribonucleoprotein U1 subunit 70
AliasesRNPU1Z; RPU1; SNRP70; Snp1; 
U1-70K; U170K; U1AP; U1RNP
GeneCards (Weizmann)SNRNP70
Ensembl hg19 (Hinxton)ENSG00000104852 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104852 [Gene_View]  ENSG00000104852 [Sequence]  chr19:49085451-49108604 [Contig_View]  SNRNP70 [Vega]
ICGC DataPortalENSG00000104852
TCGA cBioPortalSNRNP70
AceView (NCBI)SNRNP70
Genatlas (Paris)SNRNP70
SOURCE (Princeton)SNRNP70
Genetics Home Reference (NIH)SNRNP70
Genomic and cartography
GoldenPath hg38 (UCSC)SNRNP70  -     chr19:49085451-49108604 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SNRNP70  -     19q13.33   [Description]    (hg19-Feb_2009)
GoldenPathSNRNP70 - 19q13.33 [CytoView hg19]  SNRNP70 - 19q13.33 [CytoView hg38]
ImmunoBaseENSG00000104852
Genome Data Viewer NCBISNRNP70 [Mapview hg19]  
OMIM180740   
Gene and transcription
Genbank (Entrez)AK027127 AK056808 AK096783 AK293120 AL117399
RefSeq transcript (Entrez)NM_001009820 NM_001301069 NM_003089
Consensus coding sequences : CCDS (NCBI)SNRNP70
Gene ExpressionSNRNP70 [ NCBI-GEO ]   SNRNP70 [ EBI - ARRAY_EXPRESS ]   SNRNP70 [ SEEK ]   SNRNP70 [ MEM ]
Gene Expression Viewer (FireBrowse)SNRNP70 [ Firebrowse - Broad ]
GenevisibleExpression of SNRNP70 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6625
GTEX Portal (Tissue expression)SNRNP70
Human Protein AtlasENSG00000104852-SNRNP70 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SNRNP70
Human Protein Atlas [tissue]ENSG00000104852-SNRNP70 [tissue]
HPRD01617
Protein Interaction databases
BioGRIDSNRNP70
STRING (EMBL)SNRNP70
ZODIACSNRNP70
Ontologies - Pathways
Litterature
PubMed180 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSNRNP70
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:32:29 CEST 2021

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