SNTG2 (syntrophin gamma 2)

2014-11-01  

Identity

HGNC
SNTG2
LOCATION
2p25.3
LOCUSID
54221
ALIAS
G2SYN,SYN5
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 54221
MIM: 608715
HGNC: 13741
Ensembl: ENSG00000172554

Variants:

dbSNP: 54221
ClinVar: 54221
TCGA: ENSG00000172554
COSMIC: SNTG2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000172554ENST00000308624Q9NY99
ENSG00000172554ENST00000407292Q9NY99
ENSG00000172554ENST00000450962F2Z2D2
ENSG00000172554ENST00000452177F2Z2D2

Expression (GTEx)

0
1
2
3
4
5
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
124297352003Syntrophin gamma 2 regulates SCN5A gating by a PDZ domain-mediated interaction.39
172923282007Neuroligins 3 and 4X interact with syntrophin-gamma2, and the interactions are affected by autism-related mutations.9
230613792013Monozygotic twins discordant for submicroscopic chromosomal anomalies in 2p25.3 region detected by array CGH.8

Citation

Dessen P

SNTG2 (syntrophin gamma 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74042/sntg2