Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SNURFL (SNRPN upstream reading frame-like (pseudogene))

Identity

Alias_namesCXorf19
chromosome X open reading frame 19
SNRPN upstream reading frame-like
Other alias
HGNC (Hugo) SNURFL
LocusID (NCBI) 727686
Atlas_Id 46876
Location Xq27.1  [Link to chromosome band Xq27]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SNURFL   29543
Cards
Entrez_Gene (NCBI)SNURFL  727686  SNRPN upstream reading frame-like (pseudogene)
AliasesCXorf19
GeneCards (Weizmann)SNURFL
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  SNURFL [Vega]
TCGA cBioPortalSNURFL
AceView (NCBI)SNURFL
Genatlas (Paris)SNURFL
WikiGenes727686
SOURCE (Princeton)SNURFL
Genetics Home Reference (NIH)SNURFL
Genomic and cartography
GoldenPath hg38 (UCSC)SNURFL  -  
GoldenPath hg19 (UCSC)SNURFL  -  
EnsemblSNURFL - [CytoView hg19]  SNURFL - [CytoView hg38]
Mapping of homologs : NCBISNURFL [Mapview hg19]  SNURFL [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SNURFL
Gene ExpressionSNURFL [ NCBI-GEO ]   SNURFL [ EBI - ARRAY_EXPRESS ]   SNURFL [ SEEK ]   SNURFL [ MEM ]
Gene Expression Viewer (FireBrowse)SNURFL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)727686
GTEX Portal (Tissue expression)SNURFL
Protein : pattern, domain, 3D structure
UniProt/SwissProtB1AK76   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB1AK76  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB1AK76
Splice isoforms : SwissVarB1AK76
PhosPhoSitePlusB1AK76
Domains : Interpro (EBI)SNURF   
Domain families : Pfam (Sanger)SNURF (PF07192)   
Domain families : Pfam (NCBI)pfam07192   
Conserved Domain (NCBI)SNURFL
DMDM Disease mutations727686
Blocks (Seattle)SNURFL
SuperfamilyB1AK76
Peptide AtlasB1AK76
IPIIPI00046712   
Protein Interaction databases
DIP (DOE-UCLA)B1AK76
IntAct (EBI)B1AK76
BioGRIDSNURFL
STRING (EMBL)SNURFL
ZODIACSNURFL
Ontologies - Pathways
QuickGOB1AK76
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkSNURFL
Atlas of Cancer Signalling NetworkSNURFL
Wikipedia pathwaysSNURFL
Orthology - Evolution
OrthoDB727686
Phylogenetic Trees/Animal Genes : TreeFamSNURFL
HOVERGENB1AK76
HOGENOMB1AK76
Homologs : HomoloGeneSNURFL
Homology/Alignments : Family Browser (UCSC)SNURFL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSNURFL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SNURFL
dbVarSNURFL
ClinVarSNURFL
1000_GenomesSNURFL 
Exome Variant ServerSNURFL
ExAC (Exome Aggregation Consortium)SNURFL (select the gene name)
Genetic variants : HAPMAP727686
Genomic Variants (DGV)SNURFL [DGVbeta]
DECIPHERSNURFL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSNURFL 
Mutations
ICGC Data PortalSNURFL 
TCGA Data PortalSNURFL 
Broad Tumor PortalSNURFL
OASIS PortalSNURFL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDSNURFL
BioMutasearch SNURFL
DgiDB (Drug Gene Interaction Database)SNURFL
DoCM (Curated mutations)SNURFL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SNURFL (select a term)
intoGenSNURFL
Cancer3DSNURFL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSNURFL
Genetic Testing Registry SNURFL
NextProtB1AK76 [Medical]
TSGene727686
GENETestsSNURFL
Target ValidationSNURFL
Huge Navigator SNURFL [HugePedia]
snp3D : Map Gene to Disease727686
BioCentury BCIQSNURFL
ClinGenSNURFL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD727686
Chemical/Pharm GKB GenePA145149067
Clinical trialSNURFL
Miscellaneous
canSAR (ICR)SNURFL (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSNURFL
EVEXSNURFL
GoPubMedSNURFL
iHOPSNURFL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:32:22 CEST 2017

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