SNX11 (sorting nexin 11)

2014-11-01  

Identity

HGNC
SNX11
LOCATION
17q21.32
LOCUSID
29916
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 29916
MIM: 614906
HGNC: 14975
Ensembl: ENSG00000002919

Variants:

dbSNP: 29916
ClinVar: 29916
TCGA: ENSG00000002919
COSMIC: SNX11

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000002919ENST00000359238Q9Y5W9
ENSG00000002919ENST00000393405Q9Y5W9
ENSG00000002919ENST00000452859B4DJI7
ENSG00000002919ENST00000580219Q9Y5W9
ENSG00000002919ENST00000581298J3QRB9
ENSG00000002919ENST00000581705J3QRW4
ENSG00000002919ENST00000582104Q9Y5W9
ENSG00000002919ENST00000582481J3KTN6
ENSG00000002919ENST00000583320J3QKV3
ENSG00000002919ENST00000584335J3QLV8

Expression (GTEx)

0
10
20
30
40
50
60
70
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
236159012013Structure of sorting nexin 11 (SNX11) reveals a novel extended phox homology (PX) domain critical for inhibition of SNX10-induced vacuolation.6
312150012019SNX11 Identified as an Essential Host Factor for SFTS Virus Infection by CRISPR Knockout Screening.2

Citation

Dessen P

SNX11 (sorting nexin 11)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74045/snx11