Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SON (SON DNA and RNA binding protein)

Identity

Alias (NCBI)BASS1
C21orf50
DBP-5
NREBP
SON3
TOKIMS
HGNC (Hugo) SON
HGNC Alias symbDBP-5
NREBP
KIAA1019
BASS1
FLJ21099
FLJ33914
HGNC Alias nameNRE-binding protein
 negative regulatory element-binding protein
 Bax antagonist selected in Saccharomyces 1
HGNC Previous nameC21orf50
HGNC Previous nameSON DNA binding protein
LocusID (NCBI) 6651
Atlas_Id 42354
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 33543038 and ends at 33577514 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CD27 (12p13.31) / SON (21q22.11)CSPG4 (15q24.2) / SON (21q22.11)EPB41L2 (6q23.1) / SON (21q22.11)
GAPDH (12p13.31) / SON (21q22.11)KAT8 (16p11.2) / SON (21q22.11)PPFIA2 (12q21.31) / SON (21q22.11)
SON (21q22.11) / C10orf11 (10q22.2)SON (21q22.11) / CD44 (11p13)SON (21q22.11) / KLF6 (10p15.1)
SON (21q22.11) / RPL12 (9q33.3)SON (21q22.11) / XPC (3p25.1)SON 21q22.11 / C10orf11 10q22.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SON   11183
Cards
Entrez_Gene (NCBI)SON    SON DNA and RNA binding protein
AliasesBASS1; C21orf50; DBP-5; NREBP; 
SON3; TOKIMS
GeneCards (Weizmann)SON
Ensembl hg19 (Hinxton)ENSG00000159140 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159140 [Gene_View]  ENSG00000159140 [Sequence]  chr21:33543038-33577514 [Contig_View]  SON [Vega]
ICGC DataPortalENSG00000159140
TCGA cBioPortalSON
AceView (NCBI)SON
Genatlas (Paris)SON
SOURCE (Princeton)SON
Genetics Home Reference (NIH)SON
Genomic and cartography
GoldenPath hg38 (UCSC)SON  -     chr21:33543038-33577514 +  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SON  -     21q22.11   [Description]    (hg19-Feb_2009)
GoldenPathSON - 21q22.11 [CytoView hg19]  SON - 21q22.11 [CytoView hg38]
ImmunoBaseENSG00000159140
Genome Data Viewer NCBISON [Mapview hg19]  
OMIM182465   617140   
Gene and transcription
Genbank (Entrez)AB028942 AF139897 AF161428 AF161430 AF380179
RefSeq transcript (Entrez)NM_001291411 NM_001291412 NM_003103 NM_032195 NM_138925 NM_138927
Consensus coding sequences : CCDS (NCBI)SON
Gene ExpressionSON [ NCBI-GEO ]   SON [ EBI - ARRAY_EXPRESS ]   SON [ SEEK ]   SON [ MEM ]
Gene Expression Viewer (FireBrowse)SON [ Firebrowse - Broad ]
GenevisibleExpression of SON in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6651
GTEX Portal (Tissue expression)SON
Human Protein AtlasENSG00000159140-SON [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SON
Human Protein Atlas [tissue]ENSG00000159140-SON [tissue]
HPRD01678
Protein Interaction databases
BioGRIDSON
STRING (EMBL)SON
ZODIACSON
Ontologies - Pathways
Litterature
PubMed110 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSON
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:32:36 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.