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SORBS1 (sorbin and SH3 domain containing 1)

Identity

Alias (NCBI)CAP
FLAF2
R85FL
SH3D5
SH3P12
SORB1
HGNC (Hugo) SORBS1
HGNC Alias symbFLJ12406
CAP
sh3p12
ponsin
KIAA1296
HGNC Alias namec-Cbl-associated protein
HGNC Previous nameSH3D5
HGNC Previous nameSH3-domain protein 5 (ponsin)
LocusID (NCBI) 10580
Atlas_Id 57478
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 95311773 and ends at 95561371 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AKIRIN1 (1p34.3) / SORBS1 (10q24.1)GNG4 (1q42.3) / SORBS1 (10q24.1)LLGL2 (17q25.1) / SORBS1 (10q24.1)
MKI67 (10q26.2) / SORBS1 (10q24.1)MSC (8q13.3) / SORBS1 (10q24.1)PDLIM1 (10q23.33) / SORBS1 (10q24.1)
PRICKLE1 (12q12) / SORBS1 (10q24.1)SORBS1 (10q24.1) / IMMP2L (7q31.1)SORBS1 (10q24.1) / MIAT (22q12.1)
SORBS1 (10q24.1) / SORBS1 (10q24.1)SORBS1 (10q24.1) / SPOP (17q21.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SORBS1   14565
Cards
Entrez_Gene (NCBI)SORBS1    sorbin and SH3 domain containing 1
AliasesCAP; FLAF2; R85FL; SH3D5; 
SH3P12; SORB1
GeneCards (Weizmann)SORBS1
Ensembl hg19 (Hinxton)ENSG00000095637 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000095637 [Gene_View]  ENSG00000095637 [Sequence]  chr10:95311773-95561371 [Contig_View]  SORBS1 [Vega]
ICGC DataPortalENSG00000095637
TCGA cBioPortalSORBS1
AceView (NCBI)SORBS1
Genatlas (Paris)SORBS1
SOURCE (Princeton)SORBS1
Genetics Home Reference (NIH)SORBS1
Genomic and cartography
GoldenPath hg38 (UCSC)SORBS1  -     chr10:95311773-95561371 -  10q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SORBS1  -     10q24.1   [Description]    (hg19-Feb_2009)
GoldenPathSORBS1 - 10q24.1 [CytoView hg19]  SORBS1 - 10q24.1 [CytoView hg38]
ImmunoBaseENSG00000095637
Genome Data Viewer NCBISORBS1 [Mapview hg19]  
OMIM605264   
Gene and transcription
Genbank (Entrez)AB037717 AF136380 AF136381 AF330623 AF330624
RefSeq transcript (Entrez)NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_001290294 NM_001290295 NM_001290296 NM_001290297 NM_001290298 NM_001377197 NM_001377198 NM_001377199 NM_001377200 NM_001377201 NM_001377202 NM_001377203 NM_001377204 NM_001377205 NM_001377206 NM_001377207 NM_001377208 NM_001377209 NM_001384447 NM_001384448 NM_001384449 NM_001384450 NM_001384451 NM_001384452 NM_001384453 NM_001384454 NM_001384455 NM_001384456 NM_001384457 NM_001384458 NM_001384459 NM_001384460 NM_001384461 NM_001384462 NM_001384463 NM_001384464 NM_001384465 NM_006434 NM_015385 NM_024991
Consensus coding sequences : CCDS (NCBI)SORBS1
Gene ExpressionSORBS1 [ NCBI-GEO ]   SORBS1 [ EBI - ARRAY_EXPRESS ]   SORBS1 [ SEEK ]   SORBS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SORBS1 [ Firebrowse - Broad ]
GenevisibleExpression of SORBS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10580
GTEX Portal (Tissue expression)SORBS1
Human Protein AtlasENSG00000095637-SORBS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SORBS1
Human Protein Atlas [tissue]ENSG00000095637-SORBS1 [tissue]
Protein Interaction databases
BioGRIDSORBS1
STRING (EMBL)SORBS1
ZODIACSORBS1
Ontologies - Pathways
Litterature
PubMed84 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSORBS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:32:36 CEST 2021

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