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SPATA13-AS1 (SPATA13 antisense RNA 1)

Identity

Alias_namesSPATA13 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) SPATA13-AS1
LocusID (NCBI) 100874231
Atlas_Id 74117
Location 13q12.12  [Link to chromosome band 13q12]
Location_base_pair Starts at 24252749 and ends at 24254439 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SPATA13-AS1   39905
Cards
Entrez_Gene (NCBI)SPATA13-AS1  100874231  SPATA13 antisense RNA 1
Aliases
GeneCards (Weizmann)SPATA13-AS1
Ensembl hg19 (Hinxton)ENSG00000227213 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227213 [Gene_View]  chr13:24252749-24254439 [Contig_View]  SPATA13-AS1 [Vega]
ICGC DataPortalENSG00000227213
TCGA cBioPortalSPATA13-AS1
AceView (NCBI)SPATA13-AS1
Genatlas (Paris)SPATA13-AS1
WikiGenes100874231
SOURCE (Princeton)SPATA13-AS1
Genetics Home Reference (NIH)SPATA13-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SPATA13-AS1  -     chr13:24252749-24254439 -  13q12.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SPATA13-AS1  -     13q12.12   [Description]    (hg19-Feb_2009)
EnsemblSPATA13-AS1 - 13q12.12 [CytoView hg19]  SPATA13-AS1 - 13q12.12 [CytoView hg38]
Mapping of homologs : NCBISPATA13-AS1 [Mapview hg19]  SPATA13-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AV761850
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SPATA13-AS1
Cluster EST : UnigeneHs.577998 [ NCBI ]
CGAP (NCI)Hs.577998
Alternative Splicing GalleryENSG00000227213
Gene ExpressionSPATA13-AS1 [ NCBI-GEO ]   SPATA13-AS1 [ EBI - ARRAY_EXPRESS ]   SPATA13-AS1 [ SEEK ]   SPATA13-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SPATA13-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874231
GTEX Portal (Tissue expression)SPATA13-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPATA13-AS1
DMDM Disease mutations100874231
Blocks (Seattle)SPATA13-AS1
Human Protein AtlasENSG00000227213
Protein Interaction databases
FunCoupENSG00000227213
BioGRIDSPATA13-AS1
STRING (EMBL)SPATA13-AS1
ZODIACSPATA13-AS1
Ontologies - Pathways
Huge Navigator SPATA13-AS1 [HugePedia]
snp3D : Map Gene to Disease100874231
BioCentury BCIQSPATA13-AS1
ClinGenSPATA13-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874231
Clinical trialSPATA13-AS1
Miscellaneous
canSAR (ICR)SPATA13-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPATA13-AS1
EVEXSPATA13-AS1
GoPubMedSPATA13-AS1
iHOPSPATA13-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:43:46 CEST 2017

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