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SPATA17-AS1 (SPATA17 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SPATA17-AS1
LocusID (NCBI) 103752555
Atlas_Id 74119
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 217954540 and ends at 217958462 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SPATA17-AS1   41086
Cards
Entrez_Gene (NCBI)SPATA17-AS1  103752555  SPATA17 antisense RNA 1
Aliases
GeneCards (Weizmann)SPATA17-AS1
Ensembl hg19 (Hinxton)ENSG00000234070 [Gene_View]  chr1:217954540-217958462 [Contig_View]  SPATA17-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000234070 [Gene_View]  chr1:217954540-217958462 [Contig_View]  SPATA17-AS1 [Vega]
ICGC DataPortalENSG00000234070
TCGA cBioPortalSPATA17-AS1
AceView (NCBI)SPATA17-AS1
Genatlas (Paris)SPATA17-AS1
WikiGenes103752555
SOURCE (Princeton)SPATA17-AS1
Genetics Home Reference (NIH)SPATA17-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)SPATA17-AS1  -     chr1:217954540-217958462 -  1q41   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SPATA17-AS1  -     1q41   [Description]    (hg38-Dec_2013)
EnsemblSPATA17-AS1 - 1q41 [CytoView hg19]  SPATA17-AS1 - 1q41 [CytoView hg38]
Mapping of homologs : NCBISPATA17-AS1 [Mapview hg19]  SPATA17-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI025201 HG493213
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929294
Consensus coding sequences : CCDS (NCBI)SPATA17-AS1
Cluster EST : UnigeneHs.602803 [ NCBI ]
CGAP (NCI)Hs.602803
Alternative Splicing GalleryENSG00000234070
Gene ExpressionSPATA17-AS1 [ NCBI-GEO ]   SPATA17-AS1 [ EBI - ARRAY_EXPRESS ]   SPATA17-AS1 [ SEEK ]   SPATA17-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SPATA17-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103752555
GTEX Portal (Tissue expression)SPATA17-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPATA17-AS1
DMDM Disease mutations103752555
Blocks (Seattle)SPATA17-AS1
Human Protein AtlasENSG00000234070
Protein Interaction databases
FunCoupENSG00000234070
BioGRIDSPATA17-AS1
STRING (EMBL)SPATA17-AS1
ZODIACSPATA17-AS1
Ontologies - Pathways
Huge Navigator SPATA17-AS1 [HugePedia]
snp3D : Map Gene to Disease103752555
BioCentury BCIQSPATA17-AS1
ClinGenSPATA17-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103752555
Clinical trialSPATA17-AS1
Miscellaneous
canSAR (ICR)SPATA17-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPATA17-AS1
EVEXSPATA17-AS1
GoPubMedSPATA17-AS1
iHOPSPATA17-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:46:18 CET 2017

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