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SPATA3-AS1 (SPATA3 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) SPATA3-AS1
LocusID (NCBI) 348761
Atlas_Id 74138
Location 2q37.1  [Link to chromosome band 2q37]
Location_base_pair Starts at 230984368 and ends at 230996032 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SPATA3-AS1   28013
Cards
Entrez_Gene (NCBI)SPATA3-AS1  348761  SPATA3 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)SPATA3-AS1
Ensembl hg19 (Hinxton)ENSG00000238062 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238062 [Gene_View]  chr2:230984368-230996032 [Contig_View]  SPATA3-AS1 [Vega]
ICGC DataPortalENSG00000238062
TCGA cBioPortalSPATA3-AS1
AceView (NCBI)SPATA3-AS1
Genatlas (Paris)SPATA3-AS1
WikiGenes348761
SOURCE (Princeton)SPATA3-AS1
Genetics Home Reference (NIH)SPATA3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SPATA3-AS1  -     chr2:230984368-230996032 -  2q37.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SPATA3-AS1  -     2q37.1   [Description]    (hg19-Feb_2009)
EnsemblSPATA3-AS1 - 2q37.1 [CytoView hg19]  SPATA3-AS1 - 2q37.1 [CytoView hg38]
Mapping of homologs : NCBISPATA3-AS1 [Mapview hg19]  SPATA3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC047542 BU620061 BX107322 DB459748
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SPATA3-AS1
Cluster EST : UnigeneHs.404807 [ NCBI ]
CGAP (NCI)Hs.404807
Alternative Splicing GalleryENSG00000238062
Gene ExpressionSPATA3-AS1 [ NCBI-GEO ]   SPATA3-AS1 [ EBI - ARRAY_EXPRESS ]   SPATA3-AS1 [ SEEK ]   SPATA3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SPATA3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)348761
GTEX Portal (Tissue expression)SPATA3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPATA3-AS1
DMDM Disease mutations348761
Blocks (Seattle)SPATA3-AS1
Human Protein AtlasENSG00000238062
Protein Interaction databases
FunCoupENSG00000238062
BioGRIDSPATA3-AS1
STRING (EMBL)SPATA3-AS1
ZODIACSPATA3-AS1
Ontologies - Pathways
Huge Navigator SPATA3-AS1 [HugePedia]
snp3D : Map Gene to Disease348761
BioCentury BCIQSPATA3-AS1
ClinGenSPATA3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD348761
Clinical trialSPATA3-AS1
Miscellaneous
canSAR (ICR)SPATA3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPATA3-AS1
EVEXSPATA3-AS1
GoPubMedSPATA3-AS1
iHOPSPATA3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:43:50 CEST 2017

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