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SPATA31D5P (SPATA31 subfamily D, member 5, pseudogene)

Identity

Alias_namesFAM75D5
family with sequence similarity 75, member D5
family with sequence similarity 75, member D5, pseudogene
Alias_symbol (synonym)FLJ43950
FAM75D5P
Other alias
HGNC (Hugo) SPATA31D5P
LocusID (NCBI) 347127
Atlas_Id 74134
Location 9q21.32  [Link to chromosome band 9q21]
Location_base_pair Starts at 84528468 and ends at 84534841 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SPATA31D5P   38602
Cards
Entrez_Gene (NCBI)SPATA31D5P  347127  SPATA31 subfamily D, member 5, pseudogene
AliasesFAM75D5; FAM75D5P
GeneCards (Weizmann)SPATA31D5P
Ensembl hg19 (Hinxton)ENSG00000240632 [Gene_View]  chr9:84528468-84534841 [Contig_View]  SPATA31D5P [Vega]
Ensembl hg38 (Hinxton)ENSG00000240632 [Gene_View]  chr9:84528468-84534841 [Contig_View]  SPATA31D5P [Vega]
ICGC DataPortalENSG00000240632
TCGA cBioPortalSPATA31D5P
AceView (NCBI)SPATA31D5P
Genatlas (Paris)SPATA31D5P
WikiGenes347127
SOURCE (Princeton)SPATA31D5P
Genetics Home Reference (NIH)SPATA31D5P
Genomic and cartography
GoldenPath hg19 (UCSC)SPATA31D5P  -     chr9:84528468-84534841 +  9q21.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SPATA31D5P  -     9q21.32   [Description]    (hg38-Dec_2013)
EnsemblSPATA31D5P - 9q21.32 [CytoView hg19]  SPATA31D5P - 9q21.32 [CytoView hg38]
Mapping of homologs : NCBISPATA31D5P [Mapview hg19]  SPATA31D5P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125938 AK128229 BC104780 BC104782 BX096267
RefSeq transcript (Entrez)NM_198509
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)SPATA31D5P
Cluster EST : UnigeneHs.215235 [ NCBI ]
CGAP (NCI)Hs.215235
Alternative Splicing GalleryENSG00000240632
Gene ExpressionSPATA31D5P [ NCBI-GEO ]   SPATA31D5P [ EBI - ARRAY_EXPRESS ]   SPATA31D5P [ SEEK ]   SPATA31D5P [ MEM ]
Gene Expression Viewer (FireBrowse)SPATA31D5P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)347127
GTEX Portal (Tissue expression)SPATA31D5P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPATA31D5P
DMDM Disease mutations347127
Blocks (Seattle)SPATA31D5P
Human Protein AtlasENSG00000240632
IPIIPI00929115   IPI00787464   
Protein Interaction databases
FunCoupENSG00000240632
BioGRIDSPATA31D5P
STRING (EMBL)SPATA31D5P
ZODIACSPATA31D5P
Ontologies - Pathways
Huge Navigator SPATA31D5P [HugePedia]
snp3D : Map Gene to Disease347127
BioCentury BCIQSPATA31D5P
ClinGenSPATA31D5P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD347127
Clinical trialSPATA31D5P
Miscellaneous
canSAR (ICR)SPATA31D5P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPATA31D5P
EVEXSPATA31D5P
GoPubMedSPATA31D5P
iHOPSPATA31D5P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:46:21 CET 2017

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