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SPATA8-AS1 (SPATA8 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) SPATA8-AS1
LocusID (NCBI) 100652749
Atlas_Id 74146
Location 15q26.2  [Link to chromosome band 15q26]
Location_base_pair Starts at 96772005 and ends at 96783337 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SPATA8-AS1   48627
Cards
Entrez_Gene (NCBI)SPATA8-AS1  100652749  SPATA8 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)SPATA8-AS1
Ensembl hg19 (Hinxton)ENSG00000259282 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259282 [Gene_View]  chr15:96772005-96783337 [Contig_View]  SPATA8-AS1 [Vega]
ICGC DataPortalENSG00000259282
TCGA cBioPortalSPATA8-AS1
AceView (NCBI)SPATA8-AS1
Genatlas (Paris)SPATA8-AS1
WikiGenes100652749
SOURCE (Princeton)SPATA8-AS1
Genetics Home Reference (NIH)SPATA8-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SPATA8-AS1  -     chr15:96772005-96783337 -  15q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SPATA8-AS1  -     15q26.2   [Description]    (hg19-Feb_2009)
EnsemblSPATA8-AS1 - 15q26.2 [CytoView hg19]  SPATA8-AS1 - 15q26.2 [CytoView hg38]
Mapping of homologs : NCBISPATA8-AS1 [Mapview hg19]  SPATA8-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA812851 DQ578535 HY049461 HY244176
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SPATA8-AS1
Cluster EST : UnigeneHs.303588 [ NCBI ]
CGAP (NCI)Hs.303588
Alternative Splicing GalleryENSG00000259282
Gene ExpressionSPATA8-AS1 [ NCBI-GEO ]   SPATA8-AS1 [ EBI - ARRAY_EXPRESS ]   SPATA8-AS1 [ SEEK ]   SPATA8-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SPATA8-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100652749
GTEX Portal (Tissue expression)SPATA8-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPATA8-AS1
DMDM Disease mutations100652749
Blocks (Seattle)SPATA8-AS1
Human Protein AtlasENSG00000259282
Protein Interaction databases
FunCoupENSG00000259282
BioGRIDSPATA8-AS1
STRING (EMBL)SPATA8-AS1
ZODIACSPATA8-AS1
Ontologies - Pathways
Huge Navigator SPATA8-AS1 [HugePedia]
snp3D : Map Gene to Disease100652749
BioCentury BCIQSPATA8-AS1
ClinGenSPATA8-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100652749
Clinical trialSPATA8-AS1
Miscellaneous
canSAR (ICR)SPATA8-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPATA8-AS1
EVEXSPATA8-AS1
GoPubMedSPATA8-AS1
iHOPSPATA8-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:43:52 CEST 2017

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