SPATS2L (spermatogenesis associated serine rich 2 like)

2014-08-01  

Identity

HGNC
LOCATION
2q33.1
LOCUSID
ALIAS
DNAPTP6,SGNP
FUSION GENES

Other Information

Locus ID:

NCBI: 26010
MIM: 613817
HGNC: 24574
Ensembl: ENSG00000196141

Variants:

dbSNP: 26010
ClinVar: 26010
TCGA: ENSG00000196141
COSMIC: SPATS2L

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000196141ENST00000358677Q9NUQ6
ENSG00000196141ENST00000358677A0A024R3V0
ENSG00000196141ENST00000360760Q9NUQ6
ENSG00000196141ENST00000366118H7C2G5
ENSG00000196141ENST00000409140Q9NUQ6
ENSG00000196141ENST00000409140A0A024R3V0
ENSG00000196141ENST00000409151Q9NUQ6
ENSG00000196141ENST00000409385B8ZZZ7
ENSG00000196141ENST00000409397F8W6C2
ENSG00000196141ENST00000409718Q9NUQ6
ENSG00000196141ENST00000409718A0A024R3V0
ENSG00000196141ENST00000409988Q9NUQ6
ENSG00000196141ENST00000409988A0A024R3V0
ENSG00000196141ENST00000421573C9JKE4
ENSG00000196141ENST00000423749F2Z2S1
ENSG00000196141ENST00000428692Q4ZFW0
ENSG00000196141ENST00000438761C9JW67
ENSG00000196141ENST00000439084C9IZC3
ENSG00000196141ENST00000439395C9J8M7
ENSG00000196141ENST00000444012F8WAV0
ENSG00000196141ENST00000449647F8VZ02
ENSG00000196141ENST00000451764Q9NUQ6
ENSG00000196141ENST00000451764A0A024R3V0
ENSG00000196141ENST00000453663C9JGM8
ENSG00000196141ENST00000457757F8VT91
ENSG00000196141ENST00000619961Q9NUQ6

Expression (GTEx)

0
5
10
15
20
25
30
35

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
227920822012Genome-wide association analysis in asthma subjects identifies SPATS2L as a novel bronchodilator response gene.40
206280862010Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.11
190055712008SGNP: an essential Stress Granule/Nucleolar Protein potentially involved in 5.8s rRNA processing/transport.8
253588682014Sleep quality, BDNF genotype and gene expression in individuals with chronic abdominal pain.6
230545862013Fine-mapping of restless legs locus 4 (RLS4) identifies a haplotype over the SPATS2L and KCTD18 genes.1
306446482019Genetic determinants of acute asthma therapy response in children with moderate-to-severe asthma exacerbations.1

Citation

Dessen P

SPATS2L (spermatogenesis associated serine rich 2 like)

Atlas Genet Cytogenet Oncol Haematol. 2014-08-01

Online version: http://atlasgeneticsoncology.org/gene/54660/spats2l