Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SPDYE11 (speedy/RINGO cell cycle regulator family member E11)

Identity

Other alias-
HGNC (Hugo) SPDYE11
LocusID (NCBI) 100996746
Atlas_Id 79463
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 73020996 and ends at 73027966 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SPDYE11   51507
Cards
Entrez_Gene (NCBI)SPDYE11  100996746  speedy/RINGO cell cycle regulator family member E11
Aliases
GeneCards (Weizmann)SPDYE11
Ensembl hg19 (Hinxton)ENSG00000275976 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275976 [Gene_View]  chr7:73020996-73027966 [Contig_View]  SPDYE11 [Vega]
ICGC DataPortalENSG00000275976
TCGA cBioPortalSPDYE11
AceView (NCBI)SPDYE11
Genatlas (Paris)SPDYE11
WikiGenes100996746
SOURCE (Princeton)SPDYE11
Genetics Home Reference (NIH)SPDYE11
Genomic and cartography
GoldenPath hg38 (UCSC)SPDYE11  -     chr7:73020996-73027966 -  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SPDYE11  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblSPDYE11 - 7q11.23 [CytoView hg19]  SPDYE11 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBISPDYE11 [Mapview hg19]  SPDYE11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB454277 DB519717
RefSeq transcript (Entrez)NM_001351349
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SPDYE11
Cluster EST : UnigeneHs.645327 [ NCBI ]
CGAP (NCI)Hs.645327
Alternative Splicing GalleryENSG00000275976
Gene ExpressionSPDYE11 [ NCBI-GEO ]   SPDYE11 [ EBI - ARRAY_EXPRESS ]   SPDYE11 [ SEEK ]   SPDYE11 [ MEM ]
Gene Expression Viewer (FireBrowse)SPDYE11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996746
GTEX Portal (Tissue expression)SPDYE11
Human Protein AtlasENSG00000275976-SPDYE11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPDYE11
DMDM Disease mutations100996746
Blocks (Seattle)SPDYE11
Human Protein Atlas [tissue]ENSG00000275976-SPDYE11 [tissue]
Protein Interaction databases
FunCoupENSG00000275976
BioGRIDSPDYE11
STRING (EMBL)SPDYE11
ZODIACSPDYE11
Ontologies - Pathways
Huge Navigator SPDYE11 [HugePedia]
snp3D : Map Gene to Disease100996746
BioCentury BCIQSPDYE11
ClinGenSPDYE11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996746
Clinical trialSPDYE11
Miscellaneous
canSAR (ICR)SPDYE11 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPDYE11
EVEXSPDYE11
GoPubMedSPDYE11
iHOPSPDYE11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:16 CET 2017

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