Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SPDYE13P (speedy/RINGO cell cycle regulator family member E13, pseudogene)

Identity

Other alias-
HGNC (Hugo) SPDYE13P
LocusID (NCBI) 105180390
Atlas_Id 79358
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 73019912 and ends at 73028166 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SPDYE13P   51509
Cards
Entrez_Gene (NCBI)SPDYE13P  105180390  speedy/RINGO cell cycle regulator family member E13, pseudogene
Aliases
GeneCards (Weizmann)SPDYE13P
Ensembl hg19 (Hinxton)ENSG00000274959 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274959 [Gene_View]  chr7:73019912-73028166 [Contig_View]  SPDYE13P [Vega]
ICGC DataPortalENSG00000274959
TCGA cBioPortalSPDYE13P
AceView (NCBI)SPDYE13P
Genatlas (Paris)SPDYE13P
WikiGenes105180390
SOURCE (Princeton)SPDYE13P
Genetics Home Reference (NIH)SPDYE13P
Genomic and cartography
GoldenPath hg38 (UCSC)SPDYE13P  -     chr7:73019912-73028166 -  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SPDYE13P  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblSPDYE13P - 7q11.23 [CytoView hg19]  SPDYE13P - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBISPDYE13P [Mapview hg19]  SPDYE13P [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC047594
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SPDYE13P
Cluster EST : UnigeneHs.645327 [ NCBI ]
CGAP (NCI)Hs.645327
Alternative Splicing GalleryENSG00000274959
Gene ExpressionSPDYE13P [ NCBI-GEO ]   SPDYE13P [ EBI - ARRAY_EXPRESS ]   SPDYE13P [ SEEK ]   SPDYE13P [ MEM ]
Gene Expression Viewer (FireBrowse)SPDYE13P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105180390
GTEX Portal (Tissue expression)SPDYE13P
Human Protein AtlasENSG00000274959-SPDYE13P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPDYE13P
DMDM Disease mutations105180390
Blocks (Seattle)SPDYE13P
Human Protein Atlas [tissue]ENSG00000274959-SPDYE13P [tissue]
Protein Interaction databases
FunCoupENSG00000274959
BioGRIDSPDYE13P
STRING (EMBL)SPDYE13P
ZODIACSPDYE13P
Ontologies - Pathways
Huge Navigator SPDYE13P [HugePedia]
snp3D : Map Gene to Disease105180390
BioCentury BCIQSPDYE13P
ClinGenSPDYE13P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105180390
Clinical trialSPDYE13P
Miscellaneous
canSAR (ICR)SPDYE13P (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPDYE13P
EVEXSPDYE13P
GoPubMedSPDYE13P
iHOPSPDYE13P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:16 CET 2017

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