Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SPDYE17 (speedy/RINGO cell cycle regulator family member E17)

Identity

Other alias-
HGNC (Hugo) SPDYE17
LocusID (NCBI) 102723849
Atlas_Id 79716
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 73021095 and ends at 73028500 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SPDYE17   51513
Cards
Entrez_Gene (NCBI)SPDYE17  102723849  speedy/RINGO cell cycle regulator family member E17
Aliases
GeneCards (Weizmann)SPDYE17
Ensembl hg19 (Hinxton)ENSG00000186645 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186645 [Gene_View]  chr7:73021095-73028500 [Contig_View]  SPDYE17 [Vega]
ICGC DataPortalENSG00000186645
TCGA cBioPortalSPDYE17
AceView (NCBI)SPDYE17
Genatlas (Paris)SPDYE17
WikiGenes102723849
SOURCE (Princeton)SPDYE17
Genetics Home Reference (NIH)SPDYE17
Genomic and cartography
GoldenPath hg38 (UCSC)SPDYE17  -     chr7:73021095-73028500 -  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SPDYE17  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblSPDYE17 - 7q11.23 [CytoView hg19]  SPDYE17 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBISPDYE17 [Mapview hg19]  SPDYE17 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001351351
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SPDYE17
Alternative Splicing GalleryENSG00000186645
Gene ExpressionSPDYE17 [ NCBI-GEO ]   SPDYE17 [ EBI - ARRAY_EXPRESS ]   SPDYE17 [ SEEK ]   SPDYE17 [ MEM ]
Gene Expression Viewer (FireBrowse)SPDYE17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723849
GTEX Portal (Tissue expression)SPDYE17
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SPDYE17
DMDM Disease mutations102723849
Blocks (Seattle)SPDYE17
Human Protein AtlasENSG00000186645
Protein Interaction databases
FunCoupENSG00000186645
BioGRIDSPDYE17
STRING (EMBL)SPDYE17
ZODIACSPDYE17
Ontologies - Pathways
Huge Navigator SPDYE17 [HugePedia]
snp3D : Map Gene to Disease102723849
BioCentury BCIQSPDYE17
ClinGenSPDYE17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723849
Clinical trialSPDYE17
Miscellaneous
canSAR (ICR)SPDYE17 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSPDYE17
EVEXSPDYE17
GoPubMedSPDYE17
iHOPSPDYE17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:40:18 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.